XLOC_012957 (si:ch211-238g23.1)


Basic Information

Item Value
gene id XLOC_012957
gene name si:ch211-238g23.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 36914221 ~ 36920453 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025809
TCAAATGGCAAATAACATGTCAGCTGTGCTTTTTACTCGAGTTAATTTGATTAAGCCTGTATTTGTCAACGATAATCATCAAAGTGACACGATGGCTTCTCTTACATCTCCTACCGTGATGAGAAGCCCAACAGAAAACCCAGTGAAAAGGAGGAAAGGGAATAAAGCCTCTGCTTTCTTTAAGAGAGCATGGAAGGCTGTAAAGCGTCCTTTTCTTTGCTGTGACTGGAACAGAGTGGCTCCCTTTGAACCACAGTCGGATATCGATGATTTCGAGCATCTGCCTGTTCCAGGTCCCTCCAGGACCGTCGCAGCACATGCAGACCTTGAGCCGGTGTGGCTACCAGGCCAGGTCTGTGAAGATCCTCAGCCgttgagtgttccgggcccctTCAGCATCAAGCAAACAACAGATGTGCCGAATGCAGATCCGGCCCGTCCAGAGTCCTCAACGGTCCTTACAGATCATGTTGACCCTGAGCAGATGTGTCCGCCAGTCCAGGTCTGTGACCGCCTCGAGTCATTGGCTGTTCCAGGACCATCCAGGATCAAGTCTACGACTGCCGCAGATCATGTTGACCCTGAGCAGATGCGTCCGCCAGTCCAGATCTGTGAAGATCCTGAGCCgttgagtgttccgggcccctTCGGCATTAAGCAAACAGCAGATGTGCCGAATGCAGATCCGGCCCGTCCTGAGACCTCAACGGCCCTCACAGATCATGTTGACCCTGAGCAGATGCGTCCGCCAGTCCAGATCTGTGAAGATCCTCAGCCGTTGAGTGTTCCGGGCCCATCTAGGATCAAGCAAACAGCAGATCCGGCCCGTCCTGAGTCCCCAACGGCCCTGACAGGTCATGTTGATACTGAGCTAGTGTGTCTGCCAGGCCAGATCTGGGAAGATCCCCAGCCAATCAGTGTCCATGGCCTCACCAATATTAAGAAAACGACGGATGCAGATTCGGCCTGTGCTGAGTCGCCTCCGTCTGTTCAACACCCCTCTAAAATTGAAGGGACTGAGGaaaaacccaagaaaggaaggaaagggaAAAGAGTCTCTGCTTTCTTTAAGAGAGTATGGAAGGCTATAACGCGCCCTTTCCTGTGCTGTGACACAGATATAGTCCAGCATCTTACGCCACATCCAGAGCTAGAGGAAGCTAACGAAGCTTCTGGACCCCCTGGTAgATTAGATCTGTCTGATTTTAAAGTCGGAGCCGTGATTGGAGAAGGAGCGTTTGGCCAGGTGTTTGTGGCATCTTACAAACTTCGTAAAAGAGTAAAGGTTGCCCTGAAGTTTATCTACAAGAGTTTCGACGACCGCTATCTTGACATTgatgGTCATTCCACACCTGTGCTTGCGGAAGTGGCAATGATGCTTAAGTTGGCGAATGCTCCGCAATGTCCAAACATCATCGGATTACACGACTGGGTTGAGAATGAGAGAAACTTCATTCTCAGCCTGGAGTACGCAGAGTCATCCCAGACCTTGGATCAGTACATCAAAGATACATTGGACGTTGGTGAAAAGCGAGCACGCCGGTTAATGCGTCAGTTGATCCAAGCTGTAAAGTTCTGCACTGAGCGAGGAGTTTTCCATGGAGATATACACACAGAAAACATCCTGGTGACGAAACCCCAATTACAGCTCAAATTGATCGACTTTGGTTGTGCTTGGCCAATTACCAGCGAGCCTTTCGACAGCAGTGAATATCGAGGAGCTATCATATGCACGCCACCTGAGGTTTTCTTGCGCCCCATACACCATGCTGACCCAGTAAACGTCTGGACAATTGGCGTCGTTCTGTATGAAATCTTGCATGCAGATTTGCCCTTTACCGACGAACATTCAATAATGTTTGAATCCGCTGAGATGCACCCCAGGTTATCTACAGCATGCCAGGACCTGATTTCCCAGTGTTTCAAACGTAATCCAGTTAACCGGCTAAAGTTACATCAGGTTGAAGAGCACCGGTGGTTCAATCCAAAGACCCCAAATCCTGTGCAGCAGTTAAAAAAGAAGAGaaaaaaaaagaaaaaacgaaaTAAGAAGAAAGCACCATTAAAGTCACAAAACTAGCATTATCAGTTATTAATtactccctcatgtcattccaaacccctaaGACCTTACTTTTCTTCAGTGTCAGTTCATGATGTGTGTTGATGAGAGCTCTGtcctgcactgtatgtgtgtcgcactgctgacgtttacctcagatgtgcccacgctttgtttaaatgagaggaagtcgcgcaggcctctgggttTTCCGTCAGCAGTGAGACACACATCCAGTGCAGTACAGGACTTCTGAAGTCATTCTTTTTGTTTGAtaagttttgtgtttttctttctgcatTAAAGAAGTTTCTCTTCACAATGACAGCTGTAGCTCCAAACCCCTGACACCTTTCCTtatcttcagaaaacaaatgaaaatatttgagatgaaatcaaatcatcaaaccatgagagctctgtcctgcactgtatgtgtgtccactgctgacgtttacgtcagatgtgcccacgctttgtttaaatgagaggaagtcgcgcaggcctctgggttaaacgtcagcagtgcgacacacatacagtgcactgGGCTCATCTGAACGTGGGtttgagggtcagagagctctcagatttcatctcaaatgttttaatttgtgttctcAATATGAACTAAACATGAACTAAGGACATGAGGTGAttaattaatgacaataatggtAATTAATGGTGCCtagaccgcagctctgcacaagacctttggccacaggagaaatggtcgtacccaaccgagcctggtttctctcgaggttttttccttcacttttgtctattggtgaagttttgttcctcgccactgtcgccgctggcttgcttggttgggacttgtggagctgcgcatcgatggatttgctcttcagtgtttggacttccagcagtgacaattaaaccacactgaactgaacttcaactgtgaaaactggactaacgcagtttcaatttacttctatgttaagctgctttgacacaatccacattgtaaaagcgctatagaaatgaagatgaattgaactgaattaatgATGAGAGTCCATCAGGAAATCCAGTGCTGTCACAGTTTTCTCTTCTAAAGTGTCATCAAAGATCTGCTCAACTATTTTCTCCCTCATAAATGAATCTGGTGTTCTGTCATAAGAGAGACTGATGGTTTTATAATTAAGTGTTCATGATTGTTCTGTAATGAATTGTTCTTTGAATTGTTTTGTGAAGAattgcttttatatatttttaataattcagatGAAATCCTGTGAATCAAA

Function

symbol description
si:ch211-238g23.1 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000055746

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025809 True 3339 mRNA 0.46 9 36914221 36920453

Neighbor

gene id symbol gene type direction distance location
XLOC_012956 NA coding upstream 29404 36884617 ~ 36884817 (+)
XLOC_012955 ttc9b coding upstream 48835 36806545 ~ 36865386 (+)
XLOC_012954 C18H19orf47 coding upstream 114180 36782930 ~ 36800041 (+)
XLOC_012953 fosb coding upstream 139256 36769758 ~ 36774965 (+)
XLOC_012952 capn12 coding upstream 184584 36664654 ~ 36729637 (+)
XLOC_012958 NA coding downstream 22738 36943191 ~ 36944417 (+)
XLOC_012959 sipa1l3 coding downstream 94732 37015185 ~ 37201550 (+)
XLOC_012960 NA coding downstream 128052 37048505 ~ 37053102 (+)
XLOC_012961 qpctla coding downstream 298687 37219140 ~ 37234696 (+)
XLOC_012962 tbcb coding downstream 339347 37259800 ~ 37270740 (+)
XLOC_012949 NA non-coding upstream 504908 36141216 ~ 36409313 (+)
XLOC_012945 CR377223.2 non-coding upstream 1094658 35819449 ~ 35819563 (+)
XLOC_012944 CR377223.1 non-coding upstream 1107255 35806848 ~ 35806966 (+)
XLOC_012942 NA non-coding upstream 1482373 35431006 ~ 35431848 (+)
XLOC_012963 NA non-coding downstream 352062 37272515 ~ 37281166 (+)
XLOC_012964 NA non-coding downstream 438443 37358896 ~ 37363028 (+)
XLOC_012965 AL627088.2 non-coding downstream 537993 37458446 ~ 37458562 (+)

Expression


Co-expression Network