XLOC_012958


Basic Information

Item Value
gene id XLOC_012958
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 36943191 ~ 36944417 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027138
ATTGATCAAAGAGTACCATACTCATGGAAAGTGCCAAACCGGGTCAGAAATTAACCTTTCCATTAAGAGGCAATATCTAGCTTTAATAAATAGCTTTTAGCTTCATAGGAGTACTTTTAAGAATCATCGTATTCAATTTTTGTGGTGTCTACTGTGTcaaacattaattaatattaaaaataatcaggggtggatttaaccaataagcaaggtaagcagccgcttagggccccaggaaatccgag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027138 True 245 lncRNA 0.36 2 36943191 36944417

Neighbor

gene id symbol gene type direction distance location
XLOC_012957 si:ch211-238g23.1 coding upstream 22738 36914221 ~ 36920453 (+)
XLOC_012956 NA coding upstream 58374 36884617 ~ 36884817 (+)
XLOC_012955 ttc9b coding upstream 77805 36806545 ~ 36865386 (+)
XLOC_012954 C18H19orf47 coding upstream 143150 36782930 ~ 36800041 (+)
XLOC_012953 fosb coding upstream 168226 36769758 ~ 36774965 (+)
XLOC_012959 sipa1l3 coding downstream 70768 37015185 ~ 37201550 (+)
XLOC_012960 NA coding downstream 104088 37048505 ~ 37053102 (+)
XLOC_012961 qpctla coding downstream 274723 37219140 ~ 37234696 (+)
XLOC_012962 tbcb coding downstream 315383 37259800 ~ 37270740 (+)
XLOC_012963 NA coding downstream 328098 37272515 ~ 37281166 (+)
XLOC_012949 NA non-coding upstream 533878 36141216 ~ 36409313 (+)
XLOC_012945 CR377223.2 non-coding upstream 1123628 35819449 ~ 35819563 (+)
XLOC_012944 CR377223.1 non-coding upstream 1136225 35806848 ~ 35806966 (+)
XLOC_012942 NA non-coding upstream 1511343 35431006 ~ 35431848 (+)
XLOC_012964 NA non-coding downstream 414479 37358896 ~ 37363028 (+)
XLOC_012965 AL627088.2 non-coding downstream 514029 37458446 ~ 37458562 (+)
XLOC_012966 CR381582.1 non-coding downstream 1018361 37962778 ~ 37962897 (+)

Expression


Co-expression Network