XLOC_013013 (bcl7bb)


Basic Information

Item Value
gene id XLOC_013013
gene name bcl7bb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 41549764 ~ 41559418 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025889
CGGAGGAAGGCGAGAAAAAGAGGAAGATCTTGACAAACTAATAAAAGCCATCATAATGTCTGGACGGTCCGTGCGAGCGGAGACGCGCAGCCGTGCAAAAGATGACATCAAAAAAGTAATGGCGGCCATTGAGAGGGTTCGGCGGTGGGAAAAAAAGTGGGTTACAGTCGGAGACACTTCATTACGGATATTTAAATGGGTTCCGGTAACAGAGACGAAACAGATATACAAGCCTAAGGGGGCAGGTCCTGCGGTGAGGGAACTGAAGGGCTTTCCTACAGATGTGGTGCTGGAAAATGCCCGTTCTGTTCTACTGGATTTCCAGGATGACAACAGTAATCAGAGTTTCCTATCAGATGCCTATCAGTCTAATACCAAAGTGGACAGCAGTAGCAACTCCAGTCCACAGCATGTGAGTGAAGCAGTGAGTCCTTCACATCCTCCTTATTACCGGACGGAGGACTCACAGCCACCCACACTGGGACAGGAGAGCATGGAGGCTGAGAGAGAGGCTTCAACGACCAGCAGTGAGGTGACAGATGAGCCTCCAACACTCATTAAAGAAGACGTGCTGTCTCTCTCTACTCAGGAGGAAGAGGAGGCAATCGGAGCTCCACCGCTTAAAAGAGTTTGCACTGAGCATAACTCAACCGTCAGTTAACACAGATATGCTGAACATTGCACATCAAGACTACAGAAgacttttttaaagcagaacTGCAAATTTAAGAGACATTTTACAACCAGCCAAATGCCTGATATCCGCTTACAATTTATGATCATTAAACAAGCTTGAAATGTTGTGTTTTGTACAATTTAAAAGACTTTACTTCGGGTATTTCTTATGAAGGTAAAGCAGTTTGTAATAAATACATCATGAAAACTGTTATTCTGAACTGAGAATGAACTTGGTCAGGATAATACACGTGTCTGCATGGAGTGATGATTGGTTTAACAGTATTACAAAACAGTAGAGTTTTAGCtgaatttgttttgtgtttgtgataGCTTTGACATTATACAAATGacttttattgctttgttttacTTAGCTTTTCTGAATAATAGTTCAACGCATGCAATTTAGGGCAGTTCTAAATGACATCCGCGTCAAcaatttcttgatttttatttttaatgtttgttgtattgcaTCCAATTActgaacattttattaaaaacaaaaaagggaaTGCATAGCTTTTATACATGTCAGATTTGTATTTTGAATATAAAGACTTCCATTTTACATTGTAAGTAtttttcagatgaaaaaaaaaagtgtattattcATGCAGTGTTGTCTGTAAAGTTGGACTTGTTCGCAGAagatatgaaaataaaacaactttGGTTTAA

Function

symbol description
bcl7bb Orthologous to human BCL7B (BAF chromatin remodeling complex subunit BCL7B).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-010328-17 Orthologous to human BCL7B (BAF chromatin remodeling complex subunit BCL7B).

Ensembl:

ensembl_id ENSDARG00000040396

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025889 True 1359 mRNA 0.40 6 41549764 41559418

Neighbor

gene id symbol gene type direction distance location
XLOC_013012 tsen34 coding upstream 2446 41542542 ~ 41547318 (+)
XLOC_013011 selenot1b coding upstream 10508 41527877 ~ 41539256 (+)
XLOC_013010 ccnl1a coding upstream 23276 41512102 ~ 41526488 (+)
XLOC_013009 si:ch211-203b8.6 coding upstream 39964 41495841 ~ 41509800 (+)
XLOC_013008 veph1 coding upstream 84158 41313999 ~ 41465606 (+)
XLOC_013014 baz1b coding downstream 1404 41560822 ~ 41591684 (+)
XLOC_013015 CU326349.3 coding downstream 98069 41657487 ~ 41659824 (+)
XLOC_013016 CU326349.2 coding downstream 108766 41668184 ~ 41668309 (+)
XLOC_013017 CU326349.1 coding downstream 153658 41713076 ~ 41713190 (+)
XLOC_013018 trpc6b coding downstream 208939 41768357 ~ 41808741 (+)
XLOC_013006 NA non-coding upstream 322562 41188739 ~ 41227202 (+)
XLOC_013004 NA non-coding upstream 647157 40901898 ~ 40902607 (+)
XLOC_013003 NA non-coding upstream 786713 40760641 ~ 40763051 (+)
XLOC_013002 NA non-coding upstream 880028 40668067 ~ 40669736 (+)
XLOC_012994 NA non-coding upstream 1029136 40518736 ~ 40520628 (+)
XLOC_013020 CABZ01027964.1 non-coding downstream 372301 41931719 ~ 41931833 (+)
XLOC_013021 NA non-coding downstream 512310 42071728 ~ 42091211 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000028_05243545_05244982 BCL7BB coding CI01000028 null 5243497 ~ 5245074 (-)