XLOC_013023


Basic Information

Item Value
gene id XLOC_013023
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 42653154 ~ 42653955 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027153
CTTTCCAGCACGACCAAAAGAGTCGGGACAGACGTATTTACCGTCCTAATACCTCTATAAATGTGCCATGATTGATTCGTCCTGGATTATTCTTGTGTCAGGGCACATCTGAAAAGCCCTGTAATGAGACGCATACGTCCCTCCACAGCTGCAACTCGATCACAAGTGATAAACGAGACACATGCCGAGGGATCTGTGACAAGTATTGTGGAAGAGAACGGAGTGGGGATGGAAGTGCGAGAAAGAAACCTAATTTCTTTTCAAAGTGTGTTTTCCCTCTTGTCTCGCGGAGCTGGAATGAATGGGTCGGTCAGTCACTCTAGGTAGTGTTTGTGAGAGCTCAAGGCGACACAGAAATTGGTTTCTTACCTGGTGTTGGCGAGCTGTGAATTGAGAGAGCAAGGAGTCTTCCCTGCGGAAGCAGTTCCAAACTGTGCACAGTTAATGGCATATTGCCAAAGGTTTTGTCTAGGCTCCATCAGACTGCAGTATCGATTTCCGCAGATGACTTCATCCAGGGATCAACAATAGCCGGTGTCTTTGAGTGCTCTTTGACTGTACCCAGCGCCGTTGTAATGGtgatcaataataaaaatgatatgcACTTAGACTGATGTTGTGCAATGCAACAATTAGACAGCACAATCCCCATTACCAGACACTCCGAATGTCTGAAACGCAAACATAAACAAGTGCTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027153 True 698 lncRNA 0.46 2 42653154 42653955

Neighbor

gene id symbol gene type direction distance location
XLOC_013022 NA coding upstream 12463 42639068 ~ 42640691 (+)
XLOC_013021 NA coding upstream 561943 42071728 ~ 42091211 (+)
XLOC_013020 CABZ01027964.1 coding upstream 721321 41931719 ~ 41931833 (+)
XLOC_013019 pgr coding upstream 814735 41820039 ~ 41838419 (+)
XLOC_013018 trpc6b coding upstream 844413 41768357 ~ 41808741 (+)
XLOC_013024 NA coding downstream 118361 42772316 ~ 42772733 (+)
XLOC_013025 BX322577.1 coding downstream 119639 42773594 ~ 42779530 (+)
XLOC_013026 NA coding downstream 133358 42787313 ~ 42792357 (+)
XLOC_013027 nectin1b coding downstream 316253 42970208 ~ 43226503 (+)
XLOC_013028 si:ch211-129p13.1 coding downstream 711935 43365890 ~ 43440181 (+)
XLOC_013017 CU326349.1 non-coding upstream 939964 41713076 ~ 41713190 (+)
XLOC_013016 CU326349.2 non-coding upstream 984845 41668184 ~ 41668309 (+)
XLOC_013029 NA non-coding downstream 796132 43450087 ~ 43456039 (+)
XLOC_013030 NA non-coding downstream 984948 43638903 ~ 43746228 (+)

Expression


Co-expression Network