CI01000319_05742834_05745945


Basic Information

Item Value
gene id CI01000319_05742834_05745945
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5741331 ~ 5746141 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000319_05742834_05745945.mRNA
ATATAAATACAACAAATAATTCAAAGTAATACAATTTAGAGTTTTCATTTGTACATATTTAAATTGAGCACACAAGTAGAATATGCTTATTGCTTAATTTTAAAGTTCATGTTTTAACCAACTTATTAAATGTAGAAAATATTTTTTTTCCTGTTGAATTTACTTCATCTTGAGCTACAGGAACACAGGGATATTGACAGAACCTTACAATAAGCAGCTAGGTTCAACAAAAAAGCAACTTACATCCATGTTTACTTCATAGGAGCTAGATCACCAAATCCTTAAAATGCAGAAACATAGCTGTCATGAGCTCGATTAGCACATTCCTAATGATTAAGTTTATCAATCATCAATTGGATGTCACATACCCATGGCTGGATATGGCACCTGCATGATCCCATAAGGGCCAACTGTGTACAGGTGACTGCCAGTGCAGTCAACACCCCCTAAAATTAGCTCCGATCATACCTCGATACCTGAGAGACAGTAGCACAAGCAATTAAACGTTAATGTTTGAGTGACATCACATAAAATGCAGCCTGATGTTTGGTGCAAACATATATGATCACAGTGTAGCCTATGTGTGATAACAGATGATTATAATACACCACCAAGTCTGCACACACCTGAAGAGCATGTCTTGTATTATGTTAACTGCCATGATGACTCTTGGGTTCCTGCCACTGTTAATGGAGAAATTAATGAGGTTTGATGACAGTATATTTGATGTCTTCTCTGTGTCTGCGGCTGTTCCTGTGCCACAACAACATAAAATAAAATGATTTTGACTAATGTATATGCATTTTATGTGCTTTATAAATTATGTTATTCAATGTTTTTAAAAAGGCCATAGACAGGTTTTTTTATAACAAGTGCAATGGATATTTAATCAATATTATTTTAGCTGCAATGGCACATACACACACTTAAGTTGTTCATCAGACAATATGTACATACAAAATATTATGTTTTGATAAATGATTCAGAAGAGGGGAAAAACAAAGCACCAAGCCCCATGAAACATGTACTACGCATGTTTCATGGGGCTTGGTGCTTTGTTTTTCCCCTCTTCTGAATCATTGTAATGAATCGAGCAGGTCATGACAGGAGATAATTTTAATTAAAACGTTTTATATATTAGGCCTACTATTGTGGCAATATCAAGTTTTATGTTTGCTCTTGTATTATGTGTTATTATGATTTTGAAAATAATAGCTGCATTAATATCCTGCTCGATTGGCTTGGGTTTTGGTCTTTAATTCCAGTCTCTGAATTACCAAGCACAGAAAAGCTTTTATTGGCCCGAATGAACAAAAGTAGTCTAGGCCTACGCCTCCTCATGGGAATCCCCACAGTGTAGGCTAAACGAAACCGAAACTATATCAGAGCATCGAGAGGAAAATGCGAATTTGAAGGAACCTACCATGGGCTATAGCTCGTCTTCGATAAAGACACAATTCCTTCCTTTATTAGGCTATTTGTGCTTAGAAATAAACAAACGGGATGGAGTTCAAAATGCATCATGCTAAAGCGCTGCTCGTGGACCTGGCGATAAGCTGTGTGCTACATTACAGCACAAGTACATTGTTAAAGAATAACAGCAGTGTATTTCTCTTGTCTCATCTCTGGTTCGTGGCTGGTGTGAAGTGGGTAAGTCTCAGGTGTTTTCTGCTAAGCAGCTGGAAAGATGTGTCCGTGCGGCGTTGTGTGGCGGTGACATGCTTGATGTGTCCGGTTTATGAAAGCGTACTGTCGCTCCTCATGAACACTCAGCCGGAGTACTGGAGCGGGTCTTTGTCTTGCCCTGGAAAAACTATTACTTCTACAGCTGCAACACTTATAGCGTGTTTGTTCTGGGAAGTAAGTTTTCCCGACACAAAAAGGAAAGCGGAAAGTTCAGAATGCGCGGAGACGAAACAGAGAAACCGGGCGCTCTTCATGCGAGTGGTCCGTTATTCCAAGCCCGACGCCCCCTTACTGAGTGGAGCTTTTGTGTTTCTTTCACTTGCTGTCATATGTGACATGTGCATTCCATATTACACGGGAAAGGTCATAGACATCCTGGGAGAACATTACCAACCAAACAGCTTCATGTCAGCAATCTTTCTCATGGGTCTCCTCTCACTGGGCAGCTCTTTGTCCTCTGGGTTGCGTGGAGGTCTCTTCATGTGCACTCTGTCCAGACTGAACAAGAGAGTTCGTCTTATGCTCTTTAATTCTTTGGTCAATCAGGAGATAGGATTTTTTGAGGATAAAAAGACAGGGGACTTGACATCACGTCTGTCTGTCGACACCAAGCTAATGAGCCAATCAGTGGCAATGAACGTGAACATCCTCCTCCGCAGCTTAATCAAAAGTGTTGGCGTCCTGTATCTGATGGTCAGCCTGTCCTGGAAACTCACGCTGGTCACTTTCATCGAAGCTCCTCTGATTGCCATCACTCAAAAGATCTACAACACACACTATGAGCAATTATCAAAAGAAGTTCAGGACTCGGTAGCCAGAGCCAATGAGACAGCAGGAGAAGCGGTTGCCGGGGTGAGGACTGTACGCAGTTTCCGCATGGAATCTAGTGAAGCCTGTCGTTATGACGAACGTTTGACTGACACTCACAACCTGAAGACTCGAAGAGATACAGTGAGGGCCGTCTACCTATTAGTGCGACGGCTGATGTCGTTAGGAATTCAAGTTCTGATGATGTATTATGGTCGTCAGCTCATCAAATCAGGCTGCATGAGTACAGGCAACCTTGTGTCCTTCATCCTCTACCAGGGTGACCTGGGATCATACATTGGGTCTCTTGTCTACATGTATTCTAACATGCTAAACTCTGTGGGAGCGGCTGCTAAAGTTTTTGAGTACCTGGACAGAAAGCCACTGGTGGGCATGGATGGAAGTCTTCATCCTGAAACCTTGACTGGCAAAGTCCACTTCAAAAACCTCAACTTCTTCTATCCAACTCGACCTGATCAACCAGCCCTCAAGATACAATAAACTCAGAATGTACAGTATTATATTATAAACAATATATATGAAATTGTTTCTTAGATTAATTTTAGATCATTAATTTGTGGATTAGATTAATCTAACCACAATTAGATAATTAGATTAATTAATGCAACTTTTGAGTTCCTATTTATTTTTAGTCACTTAGTAAAACTTTATATTTTATATATCCTATTTATTCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000319_05742834_05745945.mRNA True 3190 mRNA 0.40 7 5741331 5746141

Neighbor

gene id symbol gene type direction distance location
CI01000319_05718732_05734284 NA coding upstream 6488 5718332 ~ 5734843 (+)
CI01000319_05704764_05712826 NA coding upstream 28240 5704083 ~ 5713885 (+)
CI01000319_05684798_05685353 NA coding upstream 55978 5684416 ~ 5685353 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding upstream 69871 5651114 ~ 5671460 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding upstream 114564 5618356 ~ 5626767 (+)
CI01000319_05796587_05803719 ABCB3L2 coding downstream 47547 5793688 ~ 5804150 (+)
CI01000319_05812788_05816097 NA coding downstream 66552 5812693 ~ 5816171 (+)
CI01000319_05816948_05819499 PSMB8F coding downstream 70684 5816825 ~ 5819499 (+)
CI01000319_05828294_05834113 NA coding downstream 81866 5828007 ~ 5835085 (+)
CI01000319_05872448_05880610 BRD2A, BRD2 coding downstream 125809 5871950 ~ 5880610 (+)
G452820 NA non-coding upstream 1857 5739093 ~ 5739474 (+)
G452735 NA non-coding upstream 8395 5712686 ~ 5712732 (+)
G452769 NA non-coding upstream 63306 5675428 ~ 5678025 (+)
G452705 NA non-coding upstream 86393 5593404 ~ 5654938 (+)
G452805 NA non-coding upstream 152436 5586786 ~ 5588895 (+)
G452821 NA non-coding downstream 3699 5749840 ~ 5750457 (+)
G452748 NA non-coding downstream 5577 5751718 ~ 5752959 (+)
G452825 NA non-coding downstream 108814 5854955 ~ 5855198 (+)
G452826 NA non-coding downstream 110264 5856405 ~ 5856609 (+)
G452543 NA other upstream 369847 5359700 ~ 5371484 (+)
G452545 NA other upstream 385296 5353694 ~ 5356035 (+)
G452541 NA other upstream 394337 5336085 ~ 5353023 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 950802 4787040 ~ 4790529 (+)
G452884 NA other downstream 376503 6122644 ~ 6124939 (+)

Expression


Co-expression Network