G452856


Basic Information

Item Value
gene id G452856
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5985708 ~ 5986065 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519936
CTAAACTCACAATAGCGTGGATTTCTATTGAAATGACTGTATTTTGCCTGCAAATTTTCACAAAGCAACGATGAATGTCATCAAAATAATAAACGCGAAATCAGCAGTGTTGGGGAAAGCTACTTTTAAAAGTAATGCATTACAATATTGCGTTACTCCCTAAAAAACTAATCGTGTTACTTAGTTACTTTTTATAAAAAGTAATGTTACATTACTTTTTCTCACCTGGGCTGGGCTTGCTTGTTTTTGTTTTTTATAACAACAACAAAAAAGTTTTATTTTTGGCAAACATCAAGGCTCTTTCACACCAAAAGTGAAATGAATAAGCCTCAGGCTGAAGGAAATGCATATTTACGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519936 True 358 lncRNA 0.33 1 5985708 5986065

Neighbor

gene id symbol gene type direction distance location
CI01000319_05981549_05984687 NA coding upstream 493 5981549 ~ 5985215 (+)
CI01000319_05978795_05979500 NA coding upstream 6159 5978195 ~ 5979549 (+)
CI01000319_05974099_05976045 CCDC127B coding upstream 9653 5974099 ~ 5976055 (+)
CI01000319_05887712_05890105 HSD17B8 coding upstream 94914 5887518 ~ 5890794 (+)
CI01000319_05882023_05885700 NA coding upstream 99903 5882023 ~ 5885805 (+)
CI01000319_06031126_06031401 NA coding downstream 45061 6031126 ~ 6033230 (+)
CI01000319_06044073_06049600 NA coding downstream 58008 6044073 ~ 6049961 (+)
CI01000319_06054270_06057766 SF3B4 coding downstream 67782 6053847 ~ 6057899 (+)
CI01000319_06070748_06083546 FAM63A coding downstream 82066 6068131 ~ 6083764 (+)
CI01000319_06100790_06101982 MRPL24 coding downstream 114141 6100206 ~ 6102078 (+)
G452784 NA non-coding upstream 18379 5966890 ~ 5967329 (+)
G452798 NA non-coding upstream 34497 5947541 ~ 5951211 (+)
G452826 NA non-coding upstream 129099 5856405 ~ 5856609 (+)
G452825 NA non-coding upstream 130510 5854955 ~ 5855198 (+)
G452748 NA non-coding upstream 232749 5751718 ~ 5752959 (+)
G452880 NA non-coding downstream 65302 6051367 ~ 6051568 (+)
G452760 NA non-coding downstream 72484 6058549 ~ 6060505 (+)
G452881 NA non-coding downstream 76953 6063018 ~ 6064372 (+)
G452768 NA non-coding downstream 99774 6085839 ~ 6088623 (+)
G452792 NA non-coding downstream 128436 6114501 ~ 6116089 (+)
G452735 NA other upstream 252772 5712686 ~ 5712732 (+)
G452543 NA other upstream 614224 5359700 ~ 5371484 (+)
G452545 NA other upstream 629673 5353694 ~ 5356035 (+)
G452541 NA other upstream 638714 5336085 ~ 5353023 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 1195179 4787040 ~ 4790529 (+)
G452884 NA other downstream 136579 6122644 ~ 6124939 (+)

Expression


Co-expression Network