Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000339_01385481_01386022 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 1384306 ~ 1386094 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000339_01385481_01386022.mRNA | False | 654 | mRNA | 0.44 | 3 | 1385031 | 1386022 |
| TU552574 | False | 1451 | lncRNA | 0.38 | 3 | 1384306 | 1386094 |
| TU552572 | False | 1212 | lncRNA | 0.39 | 3 | 1384545 | 1386094 |
| TU552575 | True | 1209 | lncRNA | 0.39 | 3 | 1384545 | 1386094 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_01373395_01377800 | NA | coding | downstream | 7231 | 1373395 ~ 1377800 (-) |
| CI01000339_01346138_01360618 | AIFM1 | coding | downstream | 24413 | 1345742 ~ 1360618 (-) |
| CI01000339_01327907_01343305 | GLRA3, GLRA4A, GLRA4B, GLRA4 | coding | downstream | 40091 | 1327717 ~ 1344940 (-) |
| CI01000339_01287752_01312897 | NA | coding | downstream | 72134 | 1286922 ~ 1312897 (-) |
| CI01000339_01242435_01246985 | NA | coding | downstream | 138046 | 1241131 ~ 1246985 (-) |
| CI01000339_01394345_01398989 | NA | coding | upstream | 8220 | 1394242 ~ 1398989 (-) |
| CI01000339_01515719_01522951 | APOOL | coding | upstream | 129394 | 1515416 ~ 1522951 (-) |
| CI01000339_01525582_01552389 | NA | coding | upstream | 139022 | 1525044 ~ 1552389 (-) |
| CI01000339_01653753_01656488 | UPRT, UPP | coding | upstream | 267407 | 1653429 ~ 1656890 (-) |
| CI01000339_01697846_01701846 | NA | coding | upstream | 311824 | 1697846 ~ 1701986 (-) |
| G481593 | NA | non-coding | downstream | 2297 | 1382512 ~ 1382734 (-) |
| G481589 | NA | non-coding | downstream | 16454 | 1368366 ~ 1368577 (-) |
| G481588 | NA | non-coding | downstream | 17808 | 1366947 ~ 1367223 (-) |
| G481578 | NA | non-coding | downstream | 56164 | 1328667 ~ 1328867 (-) |
| G481557 | NA | non-coding | downstream | 58124 | 1322367 ~ 1326907 (-) |
| G481597 | NA | non-coding | upstream | 27937 | 1413959 ~ 1414312 (-) |
| G481602 | NA | non-coding | upstream | 109481 | 1495503 ~ 1495930 (-) |
| G481622 | NA | non-coding | upstream | 133940 | 1519962 ~ 1520935 (-) |
| G481609 | NA | non-coding | upstream | 188501 | 1574523 ~ 1577716 (-) |
| G481646 | NA | non-coding | upstream | 217442 | 1603464 ~ 1604330 (-) |
| G481157 | NA | other | downstream | 268883 | 1114129 ~ 1116148 (-) |
| CI01000339_00932339_00951205 | SMARCA1 | other | downstream | 431597 | 931680 ~ 951205 (-) |
| G480969 | NA | other | downstream | 1294834 | 85093 ~ 90197 (-) |
| G481610 | NA | other | upstream | 185515 | 1571537 ~ 1573962 (-) |
| G481662 | NA | other | upstream | 337748 | 1723770 ~ 1733019 (-) |
| CI01000339_01988812_02024891 | NA | other | upstream | 603153 | 1988537 ~ 2025183 (-) |
| G483104 | NA | other | upstream | 2008086 | 3394108 ~ 3401228 (-) |
| G483199 | NA | other | upstream | 2391869 | 3777891 ~ 3778551 (-) |
