Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000339_01988812_02024891 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 1988537 ~ 2025183 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000339_01988812_02024891.mRNA | False | 1416 | mRNA | 0.38 | 10 | 1988537 | 2025183 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_01966606_01968496 | NA | coding | downstream | 20029 | 1966303 ~ 1968508 (-) |
| CI01000339_01936214_01951569 | RNF128A | coding | downstream | 36794 | 1936095 ~ 1951743 (-) |
| CI01000339_01918661_01934762 | TBC1D8B | coding | downstream | 53775 | 1918394 ~ 1934762 (-) |
| CI01000339_01898504_01904469 | MTMR2 | coding | downstream | 84068 | 1897994 ~ 1904469 (-) |
| CI01000339_01883001_01888066 | FAM76B, FA76B | coding | downstream | 100318 | 1882667 ~ 1888219 (-) |
| CI01000339_02047758_02052147 | GBGT1L4, GBGT1L2, ABO | coding | upstream | 22136 | 2047319 ~ 2052147 (-) |
| CI01000339_02088307_02098773 | NA | coding | upstream | 62787 | 2087970 ~ 2098773 (-) |
| CI01000339_02101102_02102520 | NA | coding | upstream | 75919 | 2101102 ~ 2103184 (-) |
| CI01000339_02116567_02137567 | NA | coding | upstream | 90173 | 2115356 ~ 2137567 (-) |
| CI01000339_02141968_02146898 | EIF1A, EIF1AX, EIF1AY, EIF1AXA, EIF1AXB, MGC81333 | coding | upstream | 116609 | 2141792 ~ 2146898 (-) |
| G481713 | NA | non-coding | downstream | 8744 | 1979398 ~ 1979793 (-) |
| G481701 | NA | non-coding | downstream | 30062 | 1958274 ~ 1958475 (-) |
| G481698 | NA | non-coding | downstream | 32938 | 1955360 ~ 1955599 (-) |
| G481691 | NA | non-coding | downstream | 225963 | 1762353 ~ 1762574 (-) |
| G481690 | NA | non-coding | downstream | 232934 | 1755154 ~ 1755603 (-) |
| G482774 | NA | non-coding | upstream | 6798 | 2031981 ~ 2032476 (-) |
| G482826 | NA | non-coding | upstream | 202460 | 2227643 ~ 2227893 (-) |
| G482827 | NA | non-coding | upstream | 202925 | 2228108 ~ 2228502 (-) |
| G482831 | NA | non-coding | upstream | 219198 | 2244381 ~ 2244697 (-) |
| G482790 | NA | non-coding | upstream | 223626 | 2248809 ~ 2254071 (-) |
| G481662 | NA | other | downstream | 255518 | 1723770 ~ 1733019 (-) |
| G481610 | NA | other | downstream | 414575 | 1571537 ~ 1573962 (-) |
| G481157 | NA | other | downstream | 872389 | 1114129 ~ 1116148 (-) |
| CI01000339_00932339_00951205 | SMARCA1 | other | downstream | 1035103 | 931680 ~ 951205 (-) |
| G480969 | NA | other | downstream | 1898340 | 85093 ~ 90197 (-) |
| G483104 | NA | other | upstream | 1368925 | 3394108 ~ 3401228 (-) |
| G483199 | NA | other | upstream | 1752708 | 3777891 ~ 3778551 (-) |
| G483285 | NA | other | upstream | 2100075 | 4125258 ~ 4170502 (-) |
| G483509 | NA | other | upstream | 2587669 | 4612852 ~ 4613318 (-) |
| G483512 | NA | other | upstream | 2592929 | 4618112 ~ 4618725 (-) |
