Gene
RNA
| Item | Value |
|---|---|
| gene id | G481602 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 1495503 ~ 1495930 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU552625 | True | 348 | lncRNA | 0.55 | 2 | 1495503 | 1495930 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_01394345_01398989 | NA | coding | downstream | 96514 | 1394242 ~ 1398989 (-) |
| CI01000339_01385481_01386022 | NA | coding | downstream | 109481 | 1384306 ~ 1386094 (-) |
| CI01000339_01373395_01377800 | NA | coding | downstream | 117703 | 1373395 ~ 1377800 (-) |
| CI01000339_01346138_01360618 | AIFM1 | coding | downstream | 134885 | 1345742 ~ 1360618 (-) |
| CI01000339_01327907_01343305 | GLRA3, GLRA4A, GLRA4B, GLRA4 | coding | downstream | 150563 | 1327717 ~ 1344940 (-) |
| CI01000339_01515719_01522951 | APOOL | coding | upstream | 19486 | 1515416 ~ 1522951 (-) |
| CI01000339_01525582_01552389 | NA | coding | upstream | 29114 | 1525044 ~ 1552389 (-) |
| CI01000339_01653753_01656488 | UPRT, UPP | coding | upstream | 157499 | 1653429 ~ 1656890 (-) |
| CI01000339_01697846_01701846 | NA | coding | upstream | 201916 | 1697846 ~ 1701986 (-) |
| CI01000339_01738384_01741637 | PLP1B | coding | upstream | 242180 | 1738110 ~ 1741677 (-) |
| G481597 | NA | non-coding | downstream | 81191 | 1413959 ~ 1414312 (-) |
| G481593 | NA | non-coding | downstream | 112769 | 1382512 ~ 1382734 (-) |
| G481589 | NA | non-coding | downstream | 126926 | 1368366 ~ 1368577 (-) |
| G481588 | NA | non-coding | downstream | 128280 | 1366947 ~ 1367223 (-) |
| G481622 | NA | non-coding | upstream | 24032 | 1519962 ~ 1520935 (-) |
| G481609 | NA | non-coding | upstream | 78593 | 1574523 ~ 1577716 (-) |
| G481646 | NA | non-coding | upstream | 107534 | 1603464 ~ 1604330 (-) |
| G481677 | NA | non-coding | upstream | 173900 | 1669830 ~ 1670040 (-) |
| G481664 | NA | non-coding | upstream | 174730 | 1670660 ~ 1676737 (-) |
| G481157 | NA | other | downstream | 379355 | 1114129 ~ 1116148 (-) |
| CI01000339_00932339_00951205 | SMARCA1 | other | downstream | 542069 | 931680 ~ 951205 (-) |
| G480969 | NA | other | downstream | 1405306 | 85093 ~ 90197 (-) |
| G481610 | NA | other | upstream | 75607 | 1571537 ~ 1573962 (-) |
| G481662 | NA | other | upstream | 227840 | 1723770 ~ 1733019 (-) |
| CI01000339_01988812_02024891 | NA | other | upstream | 493245 | 1988537 ~ 2025183 (-) |
| G483104 | NA | other | upstream | 1898178 | 3394108 ~ 3401228 (-) |
| G483199 | NA | other | upstream | 2281961 | 3777891 ~ 3778551 (-) |
