G488142



Basic Information


Item Value
gene id G488142
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 2304451 ~ 2304769 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU560048
GACCTTACATAATGAACCGTTATGTTTTTATTACCTTAGAATGAGCCATTTCTATCTACATACACCGCGGGTCTCCCCTCCATGTTAAGTCGCCATTTTGCGCCAGCATGTTTCTACAGCAGCCCTAAACGGACAAACACTCTACAGAGCGTTTCATCATGTTCTTCTTCTATATCGTTCCTGTTTTTAGAGGCAGCTTGCATCGTCACTACGTTGAATACGCACGAAGAATAAGTAGTAGTAGTCGTCTGGTTTATTAGATGCAGAGACCGTTCTTAGAAGTAAGAAGAAACCTCTGATTGACTGGCTAACTTACTGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU560048 True 319 lncRNA 0.42 1 2304451 2304769

Neighbor


gene id symbol gene type direction distance location
CI01000340_02293072_02301920 STK25B, STK25, STK25A coding downstream 1504 2293014 ~ 2302947 (-)
CI01000340_02172629_02189732 HDLBP, HDLBPA coding downstream 114719 2171683 ~ 2189732 (-)
CI01000340_02008099_02012700 SOX14.S, SOX14 coding downstream 291751 2008022 ~ 2012700 (-)
CI01000340_01952181_01975472 NA coding downstream 328165 1951515 ~ 1976286 (-)
CI01000340_01916883_01917263 NA coding downstream 387099 1915653 ~ 1917352 (-)
CI01000340_02329631_02332000 DTYMK coding upstream 24837 2329606 ~ 2332000 (-)
CI01000340_02333476_02337529 AGXTA coding upstream 28333 2333102 ~ 2337529 (-)
CI01000340_02341068_02348409 NA coding upstream 35734 2340503 ~ 2348477 (-)
CI01000340_02567081_02567521 NA coding upstream 261968 2566737 ~ 2567643 (-)
CI01000340_02936853_02939837 BCL6A, BCL6 coding upstream 630868 2935637 ~ 2939837 (-)
G488119 NA non-coding downstream 75158 2227353 ~ 2229293 (-)
G488114 NA non-coding downstream 82838 2221086 ~ 2221613 (-)
G488113 NA non-coding downstream 85536 2213189 ~ 2218915 (-)
G488104 NA non-coding downstream 106417 2197737 ~ 2198034 (-)
G488103 NA non-coding downstream 109067 2195110 ~ 2195384 (-)
G487958 NA non-coding upstream 33120 2337889 ~ 2338491 (-)
G487957 NA non-coding upstream 33825 2338594 ~ 2338987 (-)
G487961 NA non-coding upstream 34769 2339538 ~ 2339879 (-)
G488147 NA non-coding upstream 100543 2405312 ~ 2427227 (-)
G488179 NA non-coding upstream 172186 2476955 ~ 2477260 (-)
G487884 NA other downstream 402179 1895801 ~ 1902272 (-)
CI01000340_00787534_00791061 NA other downstream 1513042 786551 ~ 791409 (-)
G485786 NA other downstream 1978735 325334 ~ 325716 (-)
CI01000340_00062787_00080635 NA other downstream 2222356 62780 ~ 82095 (-)
G488782 NA other upstream 1701036 4005805 ~ 4006448 (-)
G488862 NA other upstream 2202427 4507196 ~ 4518120 (-)
CI01000340_04598932_04627160 NA other upstream 2295451 4598714 ~ 4627447 (-)
CI01000340_05321995_05329778 ATG4C other upstream 3015984 5320753 ~ 5330215 (-)
CI01000340_06095704_06194498 MAST2 other upstream 3878521 6095704 ~ 6194501 (-)

Expression



Co-expression Network