G490720


Basic Information

Item Value
gene id G490720
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 8792971 ~ 8793223 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU562901
CCACTACCTGGATGTCAAGCATCCCAAATGCATGCATTTGACTCAAGCAGAAATGAACAAAGATCTTTCTCACAAAATGCCACTAATTATGATTTATTATAAGAAAAAATAATTTCAATGTTTGGAAATGGATGCACCTGATGCACAAATGATAGAACTGGTGTCATCATATATATATATATATAAATAAAGTGCACAAAATGGGACAATGTACAGGTGCTGGTCATATAATTAGAATATCATCAAAAAGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU562901 True 253 lncRNA 0.32 1 8792971 8793223

Neighbor

gene id symbol gene type direction distance location
CI01000340_08774019_08777325 SLC48A1B, SLC48A1 coding upstream 14669 8773837 ~ 8778302 (+)
CI01000340_08763694_08772208 BIN2B coding upstream 20174 8762472 ~ 8772797 (+)
CI01000340_08746450_08751542 STK35L coding upstream 41373 8745319 ~ 8751598 (+)
CI01000340_08710260_08719614 UBE3A coding upstream 72964 8710260 ~ 8720007 (+)
CI01000340_08632493_08682360 ATP10A coding upstream 110566 8632373 ~ 8682405 (+)
CI01000340_08882602_08883850 PRSS60.1, PRSS60.2 coding downstream 89379 8882602 ~ 8883850 (+)
CI01000340_08895637_08897909 PRSS60.2 coding downstream 102147 8895370 ~ 8898290 (+)
CI01000340_08905333_08906557 GPR84 coding downstream 112110 8905333 ~ 8908001 (+)
CI01000340_08938200_08942073 NA coding downstream 144929 8938152 ~ 8942624 (+)
CI01000340_08970483_08982079 B4GN1, B4GALNT1B, B4GALNT1 coding downstream 177219 8970442 ~ 8983411 (+)
G490693 NA non-coding upstream 151496 8640547 ~ 8641475 (+)
G490575 NA non-coding upstream 433210 8359468 ~ 8359761 (+)
G490574 NA non-coding upstream 434466 8358243 ~ 8358505 (+)
G490471 NA non-coding upstream 606624 8186071 ~ 8186347 (+)
G490442 NA non-coding upstream 727450 8056185 ~ 8065521 (+)
G490721 NA non-coding downstream 187 8793410 ~ 8793894 (+)
G490724 NA non-coding downstream 5901 8799124 ~ 8799532 (+)
G490725 NA non-coding downstream 9860 8803083 ~ 8803416 (+)
G490641 NA non-coding downstream 10492 8803715 ~ 8806410 (+)
G490733 NA non-coding downstream 48215 8841438 ~ 8842135 (+)
G489634 NA other upstream 2092183 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 4127786 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 4391475 4399419 ~ 4401496 (+)
G487133 NA other upstream 4810426 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 5861171 2930635 ~ 2933935 (+)
G490645 NA other downstream 245589 9038812 ~ 9043101 (+)
G490826 NA other downstream 331961 9125184 ~ 9131397 (+)
G490839 NA other downstream 441750 9234973 ~ 9237559 (+)
G490896 NA other downstream 1038250 9831473 ~ 9845052 (+)
G492194 NA other downstream 1858460 10651683 ~ 10652694 (+)

Expression


Co-expression Network