XLOC_015413 (si:dkey-218h11.6)


Basic Information

Item Value
gene id XLOC_015413
gene name si:dkey-218h11.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 23130389 ~ 23132134 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030852
GACTTTTACAGACATGAAGCTCTCAACACATTTCAGTCAAATCTGATGAAGAAGTTTGATAGCCTCTGTGAGGGAACAGCGGCGCAGGGAAAATGTATACTCCTGAATGAGATCTACACAGAACTCTACATCACACAGAGCGAGAGTGGAGTGATCAGTAATGAGCATGAGGTAAGACAAATTGAGACACAATCCAGGAGATCAACAACAGCGGACACACCAATCAAATGCAGCGACATTTTTACACGTTTACCTGGACAAGACAAAGCCATCAGATCTGTGCTGACAAAGGGAATCGCTGGCATCGGAAAAacagtctctgtgcagaagtttaTTGTGGACTGGGTTGAAAAGAAGGAGAATCAGGACCTCCAGCTCATATTTCCACTTCCTTTCAGAGAGCTCAATCTGATGAAGGACAAAACGCTCAGACTTCCAAATCTTCTTCATGCCTTTTTCCCTGAAACAAAGAACATTGAAGTATTTGATGATAAATATACCGTGTTGTTCATTTTTGATGTTCTTGATGAGTGTTGTCTGTCTCTGAATTTTAAGAGCACTGTGAGGTTTTGTGATGTCAGTGAATCAGCCTCAGTAGACGTGCTGCTGACGAATCTGATTGTGGGgaatctgcttccctctgctcccATCTGGATCACTTCCAGACCAGCGGCAGCAAATCTCCTTCCATCTGACTGTATTCATAGAGTGACAGAGGTACGAGGTTTCGTAGACCCTCAGAAAGAGGAATACTTCAGGAAGAAGATCAGAGATCAGAGTTTGGCCAACAGAATCATCTCACACCTGAAGTCTTCCAGGAGCCTctacatcatgtgccacatcccagtgttCTGCTGGATCTCAGCCACTGTACTAGGGAAAATGTTGAATGAAGCAGAGAGTGGAGAGATTCCCAAGACTCTCACTCACATGTACACACACTTCCTGATCCTGCAAACCAACGTCAAACGTGGGAAGCACTATGAGTACAAGGTGAGAGATGAAGACATGATCCTCAGTCGGGGGAAACTAGCTTTTCAGCAGCTTGTGAAAggcaatgtgatcttctatgaggaAGACCTGAGAGACTGTGGCATTATTGTGACAGAGGCATCTGTTTACTCAGGGTTGTGCACTCAGATCTTCAGAGACGAGTTGGTTTTGTGTCAGAGGAAAGTCTTCACCTTTGTTCATCTGTGCATTCAGGAACATCTAACGGCTCTTTATGCGCACCTTTCCTGtctaaacaaaaacataaatgtctttgagcaaGTTACGTTTGAACATGTTCCTTTGTCTAACCTGCATCAGAGAGCTGTGGATGAGGGTCTACAGAGTAACAATGGACATCTGGATCTTTTCCTACGGTTTCTGTTGGGTCTGTCAGTGGAGTCAATTCAGAATCTCCGGCAGGGACAAATGAAAGGGACAAAAAGAAACTCTGACAGTTGTGAGGACACAGTTGAGTACGTCAAGACGAAGATCAGCACCGTTTTCTCTCTAGAGAAATCCATCAATCTGTTTCACTGTCTGAACGAACTGGGTGACCATTCACTAGTGGAGGAAGTACGACAGTATCTGAGAACTGAACAGCTACATAAAACCAAACTCTCTTCATCTCAGTGGTCAGCTGtggtttttgtgtttttgacagcAGAGAAGAAGCTGGAAAATTTCgaaattaatgaatttgttaGTGGAAACGACCAGACTGGAAGTGTTGAAGAAGCTGCTGCCTGTGATTAA

Function

symbol description
si:dkey-218h11.6 Predicted to be involved in intracellular signal transduction.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093680

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030852 True 1746 mRNA 0.44 1 23130389 23132134

Neighbor

gene id symbol gene type direction distance location
XLOC_015412 mfsd12a coding upstream 27240 23081247 ~ 23103149 (+)
XLOC_015411 csnk1g2a coding upstream 51641 23039041 ~ 23078748 (+)
XLOC_015410 NA coding upstream 103411 23025321 ~ 23026978 (+)
XLOC_015409 mknk2a coding upstream 105437 23006792 ~ 23024952 (+)
XLOC_015408 NA coding upstream 138360 22985130 ~ 22992029 (+)
XLOC_015414 NA coding downstream 23878 23156012 ~ 23184804 (+)
XLOC_015415 kifap3b coding downstream 90805 23222939 ~ 23293501 (+)
XLOC_015416 BX548024.3 coding downstream 125643 23257777 ~ 23257897 (+)
XLOC_015417 rnf2 coding downstream 219320 23351454 ~ 23361933 (+)
XLOC_015418 NA coding downstream 274319 23406453 ~ 23479246 (+)
XLOC_015407 NA non-coding upstream 214005 22911192 ~ 22916384 (+)
XLOC_015392 CT956055.1 non-coding upstream 1158980 21882881 ~ 21971409 (+)
XLOC_015388 NA non-coding upstream 1593117 21534038 ~ 21537272 (+)
XLOC_015419 NA non-coding downstream 282749 23414883 ~ 23421047 (+)
XLOC_015420 NA non-coding downstream 318638 23450772 ~ 23451401 (+)

Expression


Co-expression Network