XLOC_015423


Basic Information

Item Value
gene id XLOC_015423
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 23550186 ~ 23557515 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033535
CGACATTTATTTCTCAATTATGGCCGTGTAACGTAAAGTGTCACTAGTTaacagttttgtatttttgtaagtaattttaaaaataaatgttctgttGCACAAAACTCCCTGAAGCAGTTTGAGtttccaCTCTGGAGGAATCTGGAGTCTTTACCTCTGCACTATAGGAACGCTGAAGAAGATGAAATGCTGAAAAACTTTGTCCTACATCGACCCTCCATGAAAAGATAAAGAGTAAGGTGTCCTACAGAGATCATTGTCCTCTCTTCCTCAAAAGAGCCTATCTCCGGTTGGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033535 True 295 lncRNA 0.39 2 23550186 23557515

Neighbor

gene id symbol gene type direction distance location
XLOC_015421 BX470197.1 coding upstream 65838 23482798 ~ 23484348 (+)
XLOC_015418 NA coding upstream 70940 23406453 ~ 23479246 (+)
XLOC_015420 NA coding upstream 98785 23450772 ~ 23451401 (+)
XLOC_015419 NA coding upstream 129139 23414883 ~ 23421047 (+)
XLOC_015417 rnf2 coding upstream 188253 23351454 ~ 23361933 (+)
XLOC_015424 rpp40 coding downstream 55525 23613040 ~ 23620223 (+)
XLOC_015425 oxsr1a coding downstream 119664 23677179 ~ 23726605 (+)
XLOC_015426 BX649335.1 coding downstream 122358 23679873 ~ 23679989 (+)
XLOC_015427 slc22a13a coding downstream 173679 23731194 ~ 23745290 (+)
XLOC_015428 NA coding downstream 215403 23772918 ~ 23779429 (+)
XLOC_015416 BX548024.3 non-coding upstream 292289 23257777 ~ 23257897 (+)
XLOC_015414 NA non-coding upstream 365382 23156012 ~ 23184804 (+)
XLOC_015432 NA non-coding downstream 379020 23936535 ~ 23940330 (+)
XLOC_015433 CR788285.2 non-coding downstream 455735 24013250 ~ 24014943 (+)
XLOC_015434 NA non-coding downstream 465283 24022798 ~ 24024448 (+)

Expression


Co-expression Network