XLOC_015434


Basic Information

Item Value
gene id XLOC_015434
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 24022798 ~ 24024448 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033539
GTTTAACTGGGTGCATAACCCAAGTCAACGTGCCAATCAGGGCTGGAATAGAGCATGATTGTTTACCCCATATAAGCCAATCAgtacccatctctgggtaactaAAAGAGGAATTTTGTGTATCATTTCTGGTACCGTCCCCTTTCAGCATGGGACACTTGATTGTGGTGACTGCAAGATAGTGGCAGGGTGATTCTTTTGTTGTCTTTAACTGTTTAAAGCCAACTTCAAAAATGGACCTATGAACAGCTGGAATTCTGCATGGTGAAAAATCGTGTGAGGAGTACTAGTTAGTTCTCCCggttttacagtacatttaggGGTTTTGATTTGCTGTTAAGACTAAACTGATGTAACAAGTGCTGAGTGAACCTGTTTTGCACATCCACTGACACCCGAAAATGGTCCAGTGATGTCCAAAAGGGATCCCAAAAAATCAGATGTTTAGAAACCAAACCTGTTTTGGATGTCCACTGACATGCAAAAGTGGTCCACAGTTTTAGAAATCAATCCCTCTCAATTAAACATTGAGACACTAAACACATTTTGCACATCCACTGACATCCAAAAGGGGTCAGCTGGCATCCAGAAATGGTCCACTGATGTCCGAAAATGGTTCATTGACATTTGAAAGAGATCCCTACTAAACAGAAGCTGAAACACGAACTTGAACATTCACTGACATCTGAAAGCGGTCCACTGATGTCCCAAATCTGTCCTTATTATCAGATATTAAGATTCCGAACCTGTTTCCACATCAGCTGAAGTGGTCCACTGACATTTGAAAGTGGTCTGTCCTGATCAGATGTCGAGACAGCGAAAGTGTTTTGTACATCCACCAACATCCAAAAGCAGTCCAATGGCATCTGAAAACAGTCCACTGATGTCCGAAGGCTGCCCACTGTCATCCAAAAATGGTCCACTGATGTCCAAAATCGGTCCCTACTAATCAGATTTTGAGATTCCGAGGCCCCTACTGAACAGACACTGAATCTGTTTTGCATGTCCACTGAAGTCCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033539 True 1019 lncRNA 0.43 2 24022798 24024448

Neighbor

gene id symbol gene type direction distance location
XLOC_015433 CR788285.2 coding upstream 7855 24013250 ~ 24014943 (+)
XLOC_015432 NA coding upstream 82468 23936535 ~ 23940330 (+)
XLOC_015431 si:dkey-24c2.9 coding upstream 185375 23823622 ~ 23837423 (+)
XLOC_015430 gorasp1a coding upstream 202518 23808640 ~ 23820280 (+)
XLOC_015429 csrnp1a coding upstream 217659 23790748 ~ 23805139 (+)
XLOC_015435 kcnh2a coding downstream 56246 24080694 ~ 24168670 (+)
XLOC_015436 map4l coding downstream 152558 24177006 ~ 24252506 (+)
XLOC_015437 BX000358.1 coding downstream 236769 24261217 ~ 24261296 (+)
XLOC_015438 fitm1l coding downstream 280406 24304854 ~ 24308682 (+)
XLOC_015439 mrpl34 coding downstream 293017 24317465 ~ 24320183 (+)
XLOC_015428 NA non-coding upstream 243369 23772918 ~ 23779429 (+)
XLOC_015426 BX649335.1 non-coding upstream 342809 23679873 ~ 23679989 (+)
XLOC_015422 NA non-coding upstream 413522 23541727 ~ 23609276 (+)
XLOC_015440 CR384062.1 non-coding downstream 324141 24348589 ~ 24351040 (+)
XLOC_015443 NA non-coding downstream 459825 24484273 ~ 24497841 (+)
XLOC_015446 NA non-coding downstream 578844 24603292 ~ 24612068 (+)
XLOC_015449 NA non-coding downstream 691866 24716314 ~ 24720787 (+)

Expression


Co-expression Network