XLOC_015455


Basic Information

Item Value
gene id XLOC_015455
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 24903666 ~ 24906615 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033543
CTTCCATCTAATCTGTGCATGTTCATTGAATTACTCAATGTGGAAGTGAACAAACTGACCAGTCACAGTTTTCTCCATATCCTGCTGCTGGCATGACTGTGGCTCAGTGTCCTGAAGAACACGAGCACACAAGTCAGCTAGCAAAGGCACTGCAGCTTGAAGGACATCATCCTCACTACAGTCGGACGTGGCACAGGCTGTAGGGATGTCGTCAACACTTTGAGCTGCAGCATGGTCTGGAGTTTGCAAGGTCGGTGCAGTGATGGGAGAATGGAGGACATCACTGTGGTCATCAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033543 True 296 lncRNA 0.49 2 24903666 24906615

Neighbor

gene id symbol gene type direction distance location
XLOC_015454 si:dkey-149i17.7 coding upstream 16914 24885987 ~ 24886752 (+)
XLOC_015453 rab3aa coding upstream 24853 24867534 ~ 24878813 (+)
XLOC_015452 pde4ca coding upstream 37017 24781026 ~ 24866649 (+)
XLOC_015451 mpv17l2 coding upstream 124754 24770435 ~ 24778912 (+)
XLOC_015450 ifi30 coding upstream 136196 24762567 ~ 24767470 (+)
XLOC_015456 NA coding downstream 5678 24912293 ~ 24927754 (+)
XLOC_015457 agtr1a coding downstream 25062 24931677 ~ 24932753 (+)
XLOC_015458 gyg1a coding downstream 30151 24936766 ~ 24944819 (+)
XLOC_015459 stag1a coding downstream 112772 25019387 ~ 25108587 (+)
XLOC_015460 msl2a coding downstream 217883 25124498 ~ 25129409 (+)
XLOC_015449 NA non-coding upstream 182879 24716314 ~ 24720787 (+)
XLOC_015446 NA non-coding upstream 291598 24603292 ~ 24612068 (+)
XLOC_015443 NA non-coding upstream 405825 24484273 ~ 24497841 (+)
XLOC_015440 CR384062.1 non-coding upstream 552626 24348589 ~ 24351040 (+)
XLOC_015437 BX000358.1 non-coding upstream 642370 24261217 ~ 24261296 (+)
XLOC_015461 NA non-coding downstream 223908 25130523 ~ 25137789 (+)
XLOC_015468 CR392012.1 non-coding downstream 1127560 26034175 ~ 26039606 (+)
XLOC_015470 NA non-coding downstream 1259963 26166578 ~ 26167419 (+)
XLOC_015473 CR788230.1 non-coding downstream 1379850 26286465 ~ 26287505 (+)

Expression


Co-expression Network