XLOC_015456


Basic Information

Item Value
gene id XLOC_015456
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 24912293 ~ 24927754 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033263
AtaacttattgtacattatactaTTCTATTAACTTCAGATCAAACAGGCAATATCATCATGAAGCTTGAGGAGTTCATCAGCCTGCTGGTCATTCTGGACATCTACCCATCACACAACAATGTGTTTGTCTAGTGACAGGCAGTACACCACATCCCCCGCTGCAGGTCCCTGGTGTGGTTGTAGGACTACGATAGAGGGGTATAAGAGAGACGCTGAGGAAATCCATTGGGCACACTGTTATGATCAAGAGTCAGGACGGCTCTTATAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033263 True 269 lncRNA 0.44 2 24912293 24927754

Neighbor

gene id symbol gene type direction distance location
XLOC_015455 NA coding upstream 5678 24903666 ~ 24906615 (+)
XLOC_015454 si:dkey-149i17.7 coding upstream 25541 24885987 ~ 24886752 (+)
XLOC_015453 rab3aa coding upstream 33480 24867534 ~ 24878813 (+)
XLOC_015452 pde4ca coding upstream 45644 24781026 ~ 24866649 (+)
XLOC_015451 mpv17l2 coding upstream 133381 24770435 ~ 24778912 (+)
XLOC_015457 agtr1a coding downstream 3923 24931677 ~ 24932753 (+)
XLOC_015458 gyg1a coding downstream 9012 24936766 ~ 24944819 (+)
XLOC_015459 stag1a coding downstream 91633 25019387 ~ 25108587 (+)
XLOC_015460 msl2a coding downstream 196744 25124498 ~ 25129409 (+)
XLOC_015461 NA coding downstream 202769 25130523 ~ 25137789 (+)
XLOC_015449 NA non-coding upstream 191506 24716314 ~ 24720787 (+)
XLOC_015446 NA non-coding upstream 300225 24603292 ~ 24612068 (+)
XLOC_015443 NA non-coding upstream 414452 24484273 ~ 24497841 (+)
XLOC_015440 CR384062.1 non-coding upstream 561253 24348589 ~ 24351040 (+)
XLOC_015468 CR392012.1 non-coding downstream 1106421 26034175 ~ 26039606 (+)
XLOC_015470 NA non-coding downstream 1238824 26166578 ~ 26167419 (+)
XLOC_015473 CR788230.1 non-coding downstream 1358711 26286465 ~ 26287505 (+)
XLOC_015478 NA non-coding downstream 1585854 26513608 ~ 26519549 (+)

Expression


Co-expression Network