XLOC_015473 (CR788230.1)


Basic Information

Item Value
gene id XLOC_015473
gene name CR788230.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 26286465 ~ 26287505 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030946
AGTAAAGAAAGGAAGGTTTATGAGATTATGCAAGAGCTGAATGTGAGCTACGTCTTGGTAATCTTTGGTGGATTGACCAGATATTTATCTGATCACATTAATAAATTCCTGTGGATGTGCGTATTAGTGGAAGCACAGACACAGGGACGCACATAAGGGGACATGATTATTACACACCCACCAGGGAGTTTCATGTGGGCTTTGAGGGTTCTCCTGTCCTGCTCAACTGCCTCATGTACAAGATGTGTTTTTATCGCTTCAGACAGGTCTAACctgctgCCAAGTGTCTTCCTGGTTATGACAGAGTTGTAATGCTGAGATTGGCAATAAGGACTTTGAGTTGGATGTGCAGAAGCTTACTACATAGCACTGGCCTATCAGGATATACAAGGTCAAAGATCTTGACAATCACAGCCTCTCAAGAACGTAAACCCAGAAAGACAAACTCCCACTTTCCTTCAAAACAGTACTGTCTGCGCCCCGTCTCATGATGTGAGGGGAAACTGAATCTTTTTTTATACTTCTGTTGTAATTGCTTAAAGGGACATTCTTTTCATACCTTTTTGTTCTTGTTCGGCTTTTTAAAATCCTCAAATGTGATTTTGTCTGAACTGGGgaagaataataaaatatcacCTGAATACGGGGAAAATGTTCAAGTATGTTCATGAGCATGTGTGTAATCAGCTGGCCAGATAATTGTTTAATTTGTCTATGAATCAAACAATGATATGGCCAGCTGATTGCAGAAATGTCTCAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092267

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030946 True 760 unprocessed_pseudogene 0.40 2 26286465 26287505

Neighbor

gene id symbol gene type direction distance location
XLOC_015472 palm1b coding upstream 2220 26237322 ~ 26284245 (+)
XLOC_015471 plppr3a coding upstream 77040 26179096 ~ 26209425 (+)
XLOC_015470 NA coding upstream 119046 26166578 ~ 26167419 (+)
XLOC_015469 grin3ba coding upstream 129681 26060528 ~ 26156784 (+)
XLOC_015468 CR392012.1 coding upstream 246859 26034175 ~ 26039606 (+)
XLOC_015474 ptbp1a coding downstream 796 26288301 ~ 26300619 (+)
XLOC_015475 efna2a coding downstream 16122 26303627 ~ 26444503 (+)
XLOC_015476 hectd3 coding downstream 192171 26479676 ~ 26495044 (+)
XLOC_015477 rps8a coding downstream 210941 26498446 ~ 26501900 (+)
XLOC_015478 NA coding downstream 226103 26513608 ~ 26519549 (+)
XLOC_015461 NA non-coding upstream 1148676 25130523 ~ 25137789 (+)
XLOC_015456 NA non-coding upstream 1358711 24912293 ~ 24927754 (+)
XLOC_015455 NA non-coding upstream 1379850 24903666 ~ 24906615 (+)
XLOC_015479 NA non-coding downstream 305190 26592695 ~ 26595418 (+)
XLOC_015483 BX248497.1 non-coding downstream 380175 26667680 ~ 26672847 (+)
XLOC_015485 NA non-coding downstream 433563 26721068 ~ 26742206 (+)
XLOC_015486 BX511023.1 non-coding downstream 713037 27000542 ~ 27010345 (+)

Expression


Co-expression Network