XLOC_015501


Basic Information

Item Value
gene id XLOC_015501
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 28194138 ~ 28194608 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033265
GTGGAATGTAGACCATGTGAACcggttcttatttttttttaaacatgcagcTAGATAACCAAAGCAGTGCTGGAAGgaacagttgaaaaaaaaaatcattttacttGTAAAACTTGATGCAAATAAAGCCCTTGGTGCTTGGTTCTCGCTCAAATATCCCTTCTCTTATTGGATTTAAAACACAGtaaAGAATCCTACAACTGTCCTGATGAATCCTGCCACCTGACAGCCTGCAGGCACCTCGTTTCTCTTGCCAGCTCCATCTGTTTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033265 True 270 lncRNA 0.40 2 28194138 28194608

Neighbor

gene id symbol gene type direction distance location
XLOC_015500 CR925777.1 coding upstream 155513 27975554 ~ 28038625 (+)
XLOC_015499 mc4r coding upstream 260274 27932781 ~ 27933864 (+)
XLOC_015498 rnf152 coding upstream 323084 27867830 ~ 27871054 (+)
XLOC_015497 buc coding upstream 334580 27855102 ~ 27859558 (+)
XLOC_015496 FO834800.2 coding upstream 351972 27830436 ~ 27842166 (+)
XLOC_015502 NA coding downstream 50852 28245460 ~ 28350447 (+)
XLOC_015503 NA coding downstream 199335 28393943 ~ 28423487 (+)
XLOC_015504 mmp15b coding downstream 258730 28453338 ~ 28521429 (+)
XLOC_015505 nadsyn1 coding downstream 477544 28672152 ~ 28692928 (+)
XLOC_015506 cdh10a coding downstream 695328 28889936 ~ 28934284 (+)
XLOC_015489 BX649522.1 non-coding upstream 869957 27321014 ~ 27324181 (+)
XLOC_015488 BX649522.3 non-coding upstream 951427 27218149 ~ 27242711 (+)
XLOC_015486 BX511023.1 non-coding upstream 1183793 27000542 ~ 27010345 (+)
XLOC_015485 NA non-coding upstream 1451932 26721068 ~ 26742206 (+)
XLOC_015511 NA non-coding downstream 1517602 29712210 ~ 29727457 (+)
XLOC_015516 NA non-coding downstream 1878071 30072679 ~ 30089989 (+)
XLOC_015518 BX510360.1 non-coding downstream 1931806 30126414 ~ 30126936 (+)

Expression


Co-expression Network