XLOC_015503


Basic Information

Item Value
gene id XLOC_015503
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 28393943 ~ 28423487 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033552
CTCACCCCATCCGATCACAGACAGCTTGATCATGTAGTGCTTGATGTAAATGTTGAAGACTCTGATGAGAAGAAGGTAGAGATGCATGGCTTCAATGGCCATCCAGGTGAAAGAAGACAGCAGGCTGTAGTGTATAGTCAcagctataaacacacacagtccgtTCATGGACAGTGAGGCCACCCATTCGCTTAACATGAAGCTCGAGTTGAGGAGAAACAGAGCAGCACTCAGAGACACGTGAATGCTGCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033552 True 252 lncRNA 0.48 2 28393943 28423487

Neighbor

gene id symbol gene type direction distance location
XLOC_015502 NA coding upstream 43496 28245460 ~ 28350447 (+)
XLOC_015501 NA coding upstream 199335 28194138 ~ 28194608 (+)
XLOC_015500 CR925777.1 coding upstream 355318 27975554 ~ 28038625 (+)
XLOC_015499 mc4r coding upstream 460079 27932781 ~ 27933864 (+)
XLOC_015498 rnf152 coding upstream 522889 27867830 ~ 27871054 (+)
XLOC_015504 mmp15b coding downstream 29851 28453338 ~ 28521429 (+)
XLOC_015505 nadsyn1 coding downstream 248665 28672152 ~ 28692928 (+)
XLOC_015506 cdh10a coding downstream 466449 28889936 ~ 28934284 (+)
XLOC_015507 cdh12a coding downstream 572289 28995776 ~ 29116892 (+)
XLOC_015508 cdh18a coding downstream 825717 29249204 ~ 29353179 (+)
XLOC_015489 BX649522.1 non-coding upstream 1069762 27321014 ~ 27324181 (+)
XLOC_015488 BX649522.3 non-coding upstream 1151232 27218149 ~ 27242711 (+)
XLOC_015511 NA non-coding downstream 1288723 29712210 ~ 29727457 (+)
XLOC_015516 NA non-coding downstream 1649192 30072679 ~ 30089989 (+)
XLOC_015518 BX510360.1 non-coding downstream 1702927 30126414 ~ 30126936 (+)
XLOC_015521 NA non-coding downstream 1773883 30197370 ~ 30197741 (+)
XLOC_015523 CR788254.2 non-coding downstream 1845819 30269306 ~ 30270163 (+)

Expression


Co-expression Network