XLOC_015519 (kcnb2)


Basic Information

Item Value
gene id XLOC_015519
gene name kcnb2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 30144979 ~ 30177469 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031032
GCGCGGCCAGCTCTCCTGCCTCACTCTGTGCGCTGCGAGTGACAGGCTCCACACGCGACGCTTTCCGCTTTTATAAACACTTTATCATGGCTTCGTGGCGAGAATAAGCAGCAGTTTCGGTTTCATCCCAACTTCATCTTTCTGCCAATTCGGCACGAGTTGTTTGTGAGGTTTGGTCTCCACAGAATGAAGAGAACCGGCTGCCCTTCTAGCAGGGGTTCCACTGACGCCTCTCTTCCCTGAGCTGATGGACGGGAAAACTACGGGCTGACCGGCTTCGTTTTGCTTGCAGAGGTAAAGGAAGACGAGGTGAACGGCGGGAAGGTAAGgTGCAACCATGGAGGGCCTCGTTTAATCTGGATTCCTCGCCATACTCCTAATTGACATTTTAATTAGCATAACACTTGAGCAGCATCAATCATGGCTGAGAGGGCAAACTTTGGAGCTCAGAGGGTCTCCAGGCCACAGGGGTCTCTCCCGCCAGAACCCATCGACATCATCCGGACCAAAGCCAGATCCAGAAGAGTCCGGATCAACGTGGGCGGCCTGGTCCATGAGGTGCTATGGAGAACCCTGGACAGACTGCCGCGAACCCGTCTGGGCAAACTCAGAGACTGCAACACCCATGAAACCTTAATGGAGATCTGTGACGACTACAGTCTGAACGACAATGAATATTTCTTTGACAGGCACCCGGGTGCCTTTTCCTCCATTTTAAATTTTTACCGGACTGGAAAGCTGCACATGATGGAAGAGATGTGTGCTCTGTCCTTTGGCCAGGAGCTTGACTATTGGGGCATCGATGAGATCTATCTGGAGTCCTGTTGCCAGGCCCGCTACCATCAGAAGAAAGAGCAGATGAATGAAGAGCTGAGAAGAGAAGCCGAAACGCTCAGGGAAAAGGAAGGAGATCAGGTGGACACAGGCTGCTGTCCAGACAAAAGGCAGAAGCTCTGGGATTTGCTGGAGAAACCGAGCTCTTCAGTGGCTGCCAAGGTTTTGGCTATAATATCAATTCTGTTCATCATCCTCTCAACCATTGCACTGTCGCTAAATACACTGCCAGAGTTACAAGTGATTGATGAATTTGGACAGTCCAATGACAACCCAAACCTGGCCCACGTCGAAGCCGTTTGCATCGCCTGGTTCACGATGGAGTATCTTCTCCGCTTTTTGTCTTCTCCCAACAAGTGGAAGTTCTTCAAAGGACCACTGAATGTCATTGATCTCCTGGCCATCCTCCCTTACTATGTCACAATATTTCTTACCGAGTCCAACAAGAGTGTCCTCCAGTTCCAGAATGTGCGCAGGGTGGTTCAGATCTTCCGGATCATGAGAATCCTGAGAATCCTGAAACTTGCCAGACACTCAACTGGTCTCCAGTCTCTTGGCTTCACGCTGAGAAGAAGCTATAATGAACTCGGActgttgattttgtttttagCCATGGGCATCATGATCTTCTCCAGTCTAGTGTTCTTTGCTGAAAAAGATGAAGATGCCACAAAATTCACTAGTATTCCCGCTTCGTTCTGGTGGGCAACAATCACCATGACGACTGTGGGTTATGGAGATATCTATCCCCAAACTCTTCTAGGCAAAATAGTAGGTGGACTCTGTTGTATTGCTGGCGTATTAGTGATTGCTTTGCCCATTCCTATTATCGTCAACAACTTCTCTGAGTTCTACAAAGAACAGAAGCGTCAAGAAAAGGCAATCAAGCGAAGGGAAGCTCTTGAAAGGGCCAAGAGGAACGGGAGCATTGTATCGATGAACCTAAAGGATGCCTTCGCACGCAATATGGAATTGCTGGACGTTGTGATAGAAAAGAATGAGGACAAGGCCGCAGACAACCACCTTTCACCCAGTCGCTGGAACTATCAGAAGAACCCCAACTCTGAATTGGGTTCAAAAGGCTTTGATTCCAAATATCAAGAAGTTGGCCAGTTGGCTTCTCCAGAACGAGTTTTCAGATCTACTCCAAGTCCTCAACGGTTGAACGCAAAATCTCTTGAGCAAATGTACAACCAGATGACGGCCGCCTCGTCCATGAGCAGCAGTGGACCTTCAGCTAGCAAAGTGAGCACCGTTGTTGGTAGAGAAGAAGAGATGGAGATGAAGGTTGTGCAGTGTGAACCACGGCTCAAAGAAAAACCCGTCACTGAGATCAGAAGCCTGTCCAGCGTGGACAGTTTTGCTAGCTGTGCCACAGACATCAGTGAAGTCGAAAGAAGCGCACTTCTTCCTAATTTTGCAGGAAGGCATCCACGCGCTCCTCCGCCGCTCGACCTCAGCCAGATCACCTCCCTGGAGAAGCGAGCAAAGCAGCCCACCATCATCAAAGAAGGCCTCTATGAGTTTGTCCCATGCAAGTCAGATGGCAGCAGCACCATGTCACAGGGCGAGGAGAACCAAAGCTTCGATCAAAGTGACGAAAATGTGAGAAGCCCTCCTCAAGGTAACCAAGTCAAACTAAAAGGACTCAAAGTGAATTTCACTGAATCTGCAGAGGAAGGGGCGTCTAACTTGCACTTAGTGGTGACGGATGATGTAGCCACTTTGACACCAAAGGTCCCAGTATCTGACCCATTACTGCTGGCAGGTTCTCCTCGCCAAAGCCCCAGGGCTACTGAAGGGGACGGAGCCACGAGCTCTCCAGGGTTCAGCCTATCGTCTTCTGAAAGCCAAAGAGGGAGAAACCACGTCGATAGAGCCGCTGTTACTCCCACGTCCCCTAAAAGTGCACAAAACTGTGCTTCTGCCACGGCTGGTGCCGTCGGAGCAGAGGACAACATTCAAAGTGGACAGAAGGTGGACAACCACCTCCTTTCCCCCGATATCTTAAAATCTTCAGGGGATGGAGGTCGCTCACCGCCGTGTGAAACTAGCATGTGAGCTGCGTTATTCACAGAACAAAAGCATCCGAGTATGTGGACAGAAAGAGGCATACTGATGTAGTGAAGAGGATTTTCTTCTGTCTTTCTTCAACATTATTGGACTGCAGAGCCGCAGAGATTGAATTATGATCCTGAGAGACAAGGTCTGCTCTCGACTCCAGGAGCTTAGCGATATTCATTCAGAGGGAGGACGTTACAGAACAAAACACACTCTATTTGTTCTAACGTTGTTATTTTGTAACAGTATGACCCTCCATGTGAAGGATTAGCTAGCTAAATCATATATCTTTTAAATCATTGATTCAGGCAACTGCGATAAGACCACAACTGTTCATTGTAGATTTGCAGCCCACTTAACAGTTTTTTAAAGACTAATCACGGTCAAATTTGTGTTGGGTTGGTTCAATAGTTCTGACCAAAGTGCTACCAGTGGAAATTGGCTGTTAGACttgaaagaaatttttttttgacCAAAATATGCCTTCATTTGACATTTTTCTGCTAAGCAATATTCCTCAGTGGTCACAGgagaagcagtttttaattctccCCACAGAGATCAAATCAAATTCCTTATTGAACTTTTAACTGTCCCTGAGTAATTAATAGAAGTTAAACTTCCAAGAACAAAACACATCAGTTCTAAATATAATATCTACATGAGCATGTGTTTCAGTTTGCATCACTCAGTATAGATGAGCCATAGCATTTTTTAGAAAGACATAATTTGAATAATAGTTAGCATGTTTACTGCTGTGGGCAACTCTCCACATCAGTGAATCTGTATGGAAAGATCACTGTTTATGTTGCCTTCAATTCAGAATCAGCCGAGGGAAACCTATGATGGCCATAGTAAATCAACTATGCCCTCTGCTGGATGAAGGAAATGGCACTTTATTTCTATGAGATGTCAGCTTGACTGGATGGGAATATTGTACattttaagaatgttttttttgttatgttccTCTCCTGATGTGCAATACGGTTTGCCCAGGCAACAGGGAGGTCAAATGGACGTCAACAAAGTGGAGAAGCTTGAGTGACTGTATGATTTGTATATTAATTGTACATTCAAGACATTATCCGCTACATCAATTTAGTGTAGAAACACAGGTTGTGTGATGTCAATTGTACTTAAGTGGTTTTTAAAACAAACTAGGCAGGAATACAAATCCTGCTTTAAGTATTCAAATCGGTGCCTTTTCATAAACAGTCATTTATGAGAAGGCGTTAAGATCTTTGGTTTGGTTCAGACAAGTCTGTACAGAAAGTCCTACTTTTTATAGagacaaatatgcaaatataattatGTTCTCAGGTTTTTTAATATAATCTTGAAAACCCTAATGTTGAAATATGTGAAAACCATTGTCTGTCAGTCAAATCAAAAGGTGAGGAAACAACCCTGAAATAAGCACTGCACGATCATCTTCTTGCACAAGCGTTGAGCAGATTTCATCAAAACAACTTGACTATTGTATCTACATTCAGAaattacagacttatttctgCATATATCAAATTTGTTTTTCATTAAGTTCGGATCCTAGTTTGTATATCAATGTGACATTGTTTATAGCTGTACATCTTTTCTTTGAAATAGTGACTGCATTGTTCCAGAAACATAGAACCaccattaaacaaataaatgtttatacaagAAACTATGGGCATGTTCTTTAAGGCATCATtctcatctcaaactggttttatAGCAAGTTGCTTCTTTAGATGTGGCAATATGTAGCATCTTTGATGCGTTTTGACTTCAGAGACTCATGCTTCACAGTGCATATCAGTAGAAACTGAAGTGTCACAATAAACAGATGCCAAGAAATAAATCTCAAAa
>TCONS_00031033
GCTGCGAGTGACAGGCTCCACACGCGACGCTTTCCGCTTTTATAAACACTTTATCATGGCTTCGTGGCGAGAATAAGCAGCAGTTTCGGTTTCATCCCAACTTCATCTTTCTGCCAATTCGGCACGAGTTGTTTGTGAGGTTTGGTCTCCACAGAATGAAGAGAACCGGCTGCCCTTCTAGCAGGGGTTCCACTGACGCCTCTCTTCCCTGAGCTGATGGACGGGAAAACTACGGGCTGACCGGCTTCGTTTTGCTTGCAGAGGTAAAGGAAGACGAGGTGAACGGCGGGAAGgTGCAACCATGGAGGGCCTCGTTTAATCTGGATTCCTCGCCATACTCCTAATTGACATTTTAATTAGCATAACACTTGAGCAGCATCAATCATGGCTGAGAGGGCAAACTTTGGAGCTCAGAGGGTCTCCAGGCCACAGGGGTCTCTCCCGCCAGAACCCATCGACATCATCCGGACCAAAGCCAGATCCAGAAGAGTCCGGATCAACGTGGGCGGCCTGGTCCATGAGGTGCTATGGAGAACCCTGGACAGACTGCCGCGAACCCGTCTGGGCAAACTCAGAGACTGCAACACCCATGAAACCTTAATGGAGATCTGTGACGACTACAGTCTGAACGACAATGAATATTTCTTTGACAGGCACCCGGGTGCCTTTTCCTCCATTTTAAATTTTTACC
>TCONS_00031034
ATGGCTGAGAGGGCAAACTTTGGAGCTCAGAGGGTCTCCAGGCCACAGGGGTCTCTCCCGCCAGAACCCATCGACATCATCCGGACCAAAGCCAGATCCAGAAGAGTCCGGATCAACGTGGGCGGCCTGGTCCATGAGGTGCTATGGAGAACCCTGGACAGACTGCCGCGAACCCGTCTGGGCAAACTCAGAGACTGCAACACCCATGAAACCTTAATGGAGATCTGTGACGACTACAGTCTGAACGACAATGAATATTTCTTTGACAGGCACCCGGGTGCCTTTTCCTCCATTTTAAATTTTTACCGGACTGGAAAGCTGCACATGATGGAAGAGATGTGTGCTCTGTCCTTTGGCCAGGAGCTTGACTATTGGGGCATCGATGAGATCTATCTGGAGTCCTGTTGCCAGGCCCGCTACCATCAGAAGAAAGAGCAGATGAATGAAGAGCTGAGAAGAGAAGCCGAAACGCTCAGGGAAAAGGAAGGAGATCAGGTGGACACAGGCTGCTGTCCAGACAAAAGGCAGAAGCTCTGGGATTTGCTGGAGAAACCGAGCTCTTCAGTGGCTGCCAAGGTTTTGGCTATAATATCAATTCTGTTCATCATCCTCTCAACCATTGCACTGTCGCTAAATACACTGCCAGAGTTACAAGTGATTGATGAATTTGGACAGTCCAATGACAACCCAAACCTGGCCCACGTCGAAGCCGTTTGCATCGCCTGGTTCACGATGGAGTATCTTCTCCGCTTTTTGTCTTCTCCCAACAAGTGGAAGTTCTTCAAAGGACCACTGAATGTCATTGATCTCCTGGCCATCCTCCCTTACTATGTCACAATATTTCTTACCGAGTCCAACAAGAGTGTCCTCCAGTTCCAGAATGTGCGCAGGGTGGTTCAGATCTTCCGGATCATGAGAATCCTGAGAATCCTGAAACTTGCCAGACACTCAACTGGTCTCCAGTCTCTTGGCTTCACGCTGAGAAGAAGCTATAATGAACTCGGActgttgattttgtttttagCCATGGGCATCATGATCTTCTCCAGTCTAGTGTTCTTTGCTGAAAAAGATGAAGATGCCACAAAATTCACTAGTATTCCCGCTTCGTTCTGGTGGGCAACAATCACCATGACGACTGTGGGTTATGGAGATATCTATCCCCAAACTCTTCTAGGCAAAATAGTAGGTGGACTCTGTTGTATTGCTGGCGTATTAGTGATTGCTTTGCCCATTCCTATTATCGTCAACAACTTCTCTGAGTTCTACAAAGAACAGAAGCGTCAAGAAAAGGCAATCAAGCGAAGGGAAGCTCTTGAAAGGGCCAAGAGGAACGGGAGCATTGTATCGATGAACCTAAAGGATGCCTTCGCACGCAATATGGAATTGCTGGACGTTGTGATAGAAAAGAATGAGGACAAGGCCGCAGACAACCACCTTTCACCCAGTCGCTGGAACTATCAGAAGAACCCCAACTCTGAATTGGGTTCAAAAGGCTTTGATTCCAAATATCAAGAAGTTGAACGAGTTTTCAGATCTACTCCAAGTCCTCAACGGTTGAACGCAAAATCTCTTGAGCAAATGTACAACCAGATGACGGCCGCCTCTGGACCTTCAGCTAGCAAAGTGAGCACCGTTGTTGGTAGAGAAGAAGAGATGGAGATGAAGGTTGTGCAGTGTGAACCACGGCTCAAAGAAAAACCCGTCACTGAGATCAGAAGCCTGTCCAGCGTGGACAGTTTTGCTAGCTGTGCCACAGACATCAGTGAAGTCGAAAGAAGCGCACTTCTTCCTAATTTTGCAGGAAGGCATCCACGCGCTCCTCCGCCGCTCGACCTCAGCCAGATCACCTCCCTGGAGAAGCGATCAGATGGCAGCAGCACCATGTCACAGGGCGAGGAGAACCAAAGTAACCAAGTCAAACTAAAAGGACTCAAAGTGAATTTCACTGAATCTGCAGAGGAAGGGGCGTCTAACTTGCACTTAGTGGTGACGGATGATGTAGCCACTTTGACACCAAAGGTCCCAGTATCTGACCCATTACTGCTGGCAGGTTCTCCTCGCCAAAGCCCCAGGGCTACTGAAGGGGACGGAGCCACGAGCTCTCCAGGGTTCAGCCTATCGTCTTCTGAAAGCCAAAGAGGGAGAAACCACGTCGATAGAGCCGCTGTTACTCCCACGTCCCCTAAAAGTGCACAAAACTGTGCTTCTGCCACGGCTGGTGCCGTCGGAGCAGAGGACAACATTCAAAGTGGACAGAAGGTGGACAACCACCTCCTTTCCCCCGATATCTTAAAATCTTCAGGGGATGGAGGTCGCTCACCGCCGTGTGAAACTAGCATGTGA

Function

symbol description
kcnb2 Predicted to enable delayed rectifier potassium channel activity; protein heterodimerization activity; and transmembrane transporter binding activity. Predicted to be involved in potassium ion transmembrane transport and protein localization to plasma membrane. Predicted to be located in neuronal cell body membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be active in dendrite and neuronal cell body. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0055085 transmembrane transport biological_process
GO:0006811 ion transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005216 ion channel activity molecular_function
GO:0005244 voltage-gated ion channel activity molecular_function
GO:0005249 voltage-gated potassium channel activity molecular_function
GO:0005251 delayed rectifier potassium channel activity molecular_function
GO:0005267 potassium channel activity molecular_function

KEGG:

id description
ko04040 Ion channels

ZFIN:

id description
ZDB-GENE-070912-170 Predicted to enable delayed rectifier potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to act upstream of or within several processes, including potassium ion transport; protein homooligomerization; and regulation of ion transmembrane transport. Predicted to be located in dendrite; membrane; and perikaryon. Predicted to be part of voltage-gated potassium channel complex. Predicted to be integral component of membrane. Orthologous to human KCNB2 (potassium voltage-gated channel subfamily B member 2).

Ensembl:

ensembl_id ENSDARG00000038862

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031032 False 4749 mRNA 0.44 3 30144979 30177469
TCONS_00031033 False 691 mRNA 0.52 2 30145010 30147810
TCONS_00031034 True 2346 mRNA 0.49 6 30147504 30175615

Neighbor

gene id symbol gene type direction distance location
XLOC_015518 BX510360.1 coding upstream 18043 30126414 ~ 30126936 (+)
XLOC_015517 dnajb6a coding upstream 28512 30103131 ~ 30116467 (+)
XLOC_015516 NA coding upstream 54990 30072679 ~ 30089989 (+)
XLOC_015515 rbm33b coding upstream 97342 29995590 ~ 30047637 (+)
XLOC_015514 en2b coding upstream 165023 29976419 ~ 29979956 (+)
XLOC_015520 rdh10b coding downstream 4962 30182431 ~ 30186307 (+)
XLOC_015521 NA coding downstream 19901 30197370 ~ 30197741 (+)
XLOC_015522 tmem70 coding downstream 72508 30249977 ~ 30252347 (+)
XLOC_015523 CR788254.2 coding downstream 91837 30269306 ~ 30270163 (+)
XLOC_015524 CR788254.1 coding downstream 98748 30276217 ~ 30277062 (+)
XLOC_015511 NA non-coding upstream 417522 29712210 ~ 29727457 (+)
XLOC_015503 NA non-coding upstream 1721492 28393943 ~ 28423487 (+)
XLOC_015502 NA non-coding upstream 1794532 28245460 ~ 28350447 (+)
XLOC_015525 CR788254.3 non-coding downstream 99865 30277334 ~ 30280504 (+)
XLOC_015527 NA non-coding downstream 151936 30329405 ~ 30334513 (+)

Expression


Co-expression Network