XLOC_015522 (tmem70)


Basic Information

Item Value
gene id XLOC_015522
gene name tmem70
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 30249977 ~ 30252347 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031036
TGTTTAGTCATCCTGCCGTATAAGGAAGTGGGAGAACTCCACATGATAAAATGTACCAGGTTGGGATTTTACACGGATTGCGGCGTTTGTCAAAAATACAGCAACAGATCATCAGAAATGTCCAGATCGGGGTTCGTCCAGCATCCCTCAGCGATGGGAATGTTTGCAGTTCTCGGGTTGCACTTTTGACAAGGCAGGATGATTTGCTGCATGTAATgcgaaggtcatttttaaaagcacatgcaAATAAGgTTCAGTCATGTTGTGCTGTAAGATGGTACAATTCCTCACCAGTCCAATCAGAAGATGGAGATCTAATTTACTCGGGAAACCTGGGAAAAGCTATCCGCGGTGTGAAGCTTTTTTCCTATTCCAGCAGTATGTTTAGTCTCTGTGTGATGCCGTTTGTCCTCATGAAAACAGGCATGGGTGTGAACAGCTTGGCACTGCAAGTGGCTTTTTGTGGCGTTATAGGTTTCTTCACATTTTTGACTCCTGCTCTCCTCCACTTCATCACCAAAGGCTATGTCATACGCCTGTACCACAACAAGGAGACGGACATGTACACGGCCATCACTTACAGCGCTGTCCTATTGGAGAAACGGACTGTGTTTCATCAGAGTGACGTCACGATCCCTGACGTGAGCCGGATGTTTACTAGTTTTTATGCCAAGAAACGCTCTATGCTGGTCAACCCGATGCATTTTTCTCTGCCACATGATTACAACCACCTTATGGGTTATGACCGTCCGTTTTCCTTTGACATGGATGACTTCAGCAAACCAGATAAAAATTAACTTGTGTATATAATACTGGTGAATAACCAAGATGTttagtagtatttttaaaataatttcagtgCAGCATTGTAACGTATTGAATATTGGCAGGCATCACTTGTCATCTGGTATATTTGTCATGtataaaagtgtaaataaatgtaaagttgTATTTACAGTACTATCTGCACACAC
>TCONS_00031037
GGGATTTTACACGGATTGCGGCGTTTGTCAAAAATACAGCAACAGATCATCAGAAATGTCCAGATCGGGGTTCGTCCAGCATCCCTCAGCGATGGGAATGTTTGCAGTTCTCGGGTTGCACTTTTGACAAGGCAGGATGATTTGCTGCATGTAATgcgaaggtcatttttaaaagcacatgcaAATAAGgTTCAGTCATGTTGTGCTGTAAGATGGTACAATTCCTCACCAGTCCAATCAGAAGATGGAGATCTAATTTACTCGGGAAACCTGGGAAAAGCTATCCGCGGTAAATATACCACCTATAATGTAAAATACAACCAACCAATGACAAGTTATTGTCAGATCTCCAACTTAATTGTGCAAATCTGCTCTTTTGTTGAAGGTGTGAAGCTTTTTTCCTATTCCAGCAGTATGTTTAGTCTCTGTGTGATGCCGTTTGTCCTCATGAAAACAGGCATGGGTGTGAACAGCTTGGCACTGCAAGTGGCTTTTTGTGGCGTTATAGGTTTCTTCACATTTTTGACTCCTGCTCTCCTCCACTTCATCACCAAAGGCTATGTCATACGCCTGTACCACAACAAGGAGACGGACATGTACACGGCCATCACTTACAGCGCTGTCCTATTGGAGAAACGGACTGTGTTTCATCAGAGTGACGTCACGATCCCTGACGTGAGCCGGATGTTTACTAGTTTTTATGCCAAGAAACGCTCTATGCTGGTCAACCCGATGCATTTTTCTCTGCCACATGATTACAACCACCTTATGGGTTATGACCGTCCGTTTTCCTTTGACATGGATGA

Function

symbol description
tmem70 Predicted to be involved in mitochondrial proton-transporting ATP synthase complex assembly. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of mitochondrial membrane. Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 2. Orthologous to human TMEM70 (transmembrane protein 70).

GO:

id name namespace
GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly biological_process
GO:0032592 integral component of mitochondrial membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
ko03029 Mitochondrial biogenesis

ZFIN:

id description
ZDB-GENE-070912-593 Predicted to be involved in mitochondrial proton-transporting ATP synthase complex assembly. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of mitochondrial membrane. Human ortholog(s) of this gene implicated in mitochondrial complex V (ATP synthase) deficiency nuclear type 2. Orthologous to human TMEM70 (transmembrane protein 70).

Ensembl:

ensembl_id ENSDARG00000078773

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031036 False 974 mRNA 0.42 3 30249977 30252347
TCONS_00031037 True 806 mRNA 0.44 2 30250039 30252145

Neighbor

gene id symbol gene type direction distance location
XLOC_015521 NA coding upstream 52236 30197370 ~ 30197741 (+)
XLOC_015520 rdh10b coding upstream 63670 30182431 ~ 30186307 (+)
XLOC_015519 kcnb2 coding upstream 72508 30144979 ~ 30177469 (+)
XLOC_015518 BX510360.1 coding upstream 123041 30126414 ~ 30126936 (+)
XLOC_015517 dnajb6a coding upstream 133510 30103131 ~ 30116467 (+)
XLOC_015523 CR788254.2 coding downstream 16959 30269306 ~ 30270163 (+)
XLOC_015524 CR788254.1 coding downstream 23870 30276217 ~ 30277062 (+)
XLOC_015525 CR788254.3 coding downstream 24987 30277334 ~ 30280504 (+)
XLOC_015526 si:dkey-82k12.13 coding downstream 29097 30281444 ~ 30286249 (+)
XLOC_015527 NA coding downstream 77058 30329405 ~ 30334513 (+)
XLOC_015516 NA non-coding upstream 159988 30072679 ~ 30089989 (+)
XLOC_015511 NA non-coding upstream 522520 29712210 ~ 29727457 (+)
XLOC_015503 NA non-coding upstream 1826490 28393943 ~ 28423487 (+)
XLOC_015528 NA non-coding downstream 113454 30365801 ~ 31460329 (+)

Expression


Co-expression Network