XLOC_015549



Basic Information


Item Value
gene id XLOC_015549
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 31291646 ~ 31292603 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033556
AAAACACAAAGTGGAGTCAAAGTAGTTTGATTCATGAACaaatgactcttatACAGTGCATCTGTAAGTGAATCCAAAACACAAAGTGGAGTCAACGTAGCTTGATTCATGAACAAATAACTCTTATACAGTGAATCTGTAAGTGAATCAGAAACATAAAGTAAAGTCAAAGTAGTTTGATTCATGAACAAATAACTCTTTTACAGCATGTTTAGGTGAATCAAAAACACAAAGTGGAGTCAAAGTAGTTTGATTCATGAACAAATGActtttatacagcacatttagATGAATCAAAAAATAAAGTGGAGTCAAAGTAGTTTGATTCAAGAACAAAGGCtcttatatagcacatttagatgaattaaaaacattaagTGTGATCCAAGTAGTTTGATTCATGAAGAAATGACTCTTACTGTATGTAGCGCATCTGTAAGTGAATCCAAAACACAAAGTGGAGTCAAAGTAGTTTGATTCatgaacaaatgactcttatACAGCACATTTAGATGAATCAAAAACATAAAGTGGAGTCCAAGTAGTTTGATTAATAAACAGATGACTCATGTAGTGCACctgtcttagttgttttattttggctagaataaaagcagtttttaagttttttaaaaccgttttaaagcaaaaattattagcc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033556 True 661 lncRNA 0.31 2 31291646 31292603

Neighbor


gene id symbol gene type direction distance location
XLOC_015545 CT955962.3 coding upstream 73868 31100444 ~ 31217778 (+)
XLOC_015547 CT955962.1 coding upstream 183232 31107929 ~ 31108414 (+)
XLOC_015546 CT955962.2 coding upstream 190073 31101088 ~ 31101573 (+)
XLOC_015544 NA coding upstream 207566 31075576 ~ 31084080 (+)
XLOC_015543 lpin2 coding upstream 307138 30960351 ~ 30984508 (+)
XLOC_015550 colec12 coding downstream 89987 31382590 ~ 31435158 (+)
XLOC_015551 stam coding downstream 144944 31437547 ~ 31452606 (+)
XLOC_015552 si:dkey-32m20.1 coding downstream 161959 31454562 ~ 31457860 (+)
XLOC_015553 cacnb2b coding downstream 183169 31475772 ~ 31519662 (+)
XLOC_015554 NA coding downstream 244735 31537338 ~ 31540590 (+)
XLOC_015527 NA non-coding upstream 957133 30329405 ~ 30334513 (+)
XLOC_015559 NA non-coding downstream 491409 31784012 ~ 31786282 (+)
XLOC_015564 NA non-coding downstream 573896 31866499 ~ 31868755 (+)
XLOC_015567 NA non-coding downstream 727039 32019642 ~ 32127930 (+)
XLOC_015568 NA non-coding downstream 856518 32149121 ~ 32188991 (+)

Expression



Co-expression Network