XLOC_015614



Basic Information


Item Value
gene id XLOC_015614
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 34822568 ~ 34822884 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033276
GTGGAACTGATGAGTATCTACTCTGCCTTTAGTGCTTGGCAGTATGTTATTTCTGCTTGAGTTCTATCACGGACAGTTTTGCCGTCTGGCAGAAGGTGTGTGAGAGTCGGAATGTGACCTTGCTATGAATTTTAAAACTTGGTCCGTGTCTTTTGTGATATACTGCTTTGGTGCTTGTTATTTTGAATCTGTTATCTCTCATCTCTAGTATATATCTAGTGTGTTACAGGGTTGTGCACAATTCAGAGTTGACAAATTGGCTCCCTCTCTATTCATGAGAATGTGAATTGAAATGTCAGGAAGAAAAATTTACTGAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033276 True 317 lncRNA 0.39 1 34822568 34822884

Neighbor


gene id symbol gene type direction distance location
XLOC_015612 NA coding upstream 343690 34477999 ~ 34478878 (+)
XLOC_015611 NA coding upstream 382837 34439445 ~ 34439731 (+)
XLOC_015610 NA coding upstream 465899 34181145 ~ 34356669 (+)
XLOC_015609 dars2 coding upstream 649079 34138376 ~ 34173489 (+)
XLOC_015608 klhl20 coding upstream 695689 34112100 ~ 34126879 (+)
XLOC_015615 cop1 coding downstream 293743 35116627 ~ 35137217 (+)
XLOC_015616 NA coding downstream 323412 35146296 ~ 35215487 (+)
XLOC_015617 tnr coding downstream 417601 35240485 ~ 35474115 (+)
XLOC_015618 NA coding downstream 659272 35482156 ~ 35502933 (+)
XLOC_015619 FP236741.1 coding downstream 689118 35512002 ~ 35581291 (+)
XLOC_015606 dre-mir-27a non-coding upstream 920113 33902325 ~ 33902455 (+)
XLOC_015605 dre-mir-23a-3 non-coding upstream 922056 33900435 ~ 33900512 (+)
XLOC_015623 NA non-coding downstream 789671 35612555 ~ 35614298 (+)
XLOC_015626 BX571812.1 non-coding downstream 1008445 35831329 ~ 35831445 (+)
XLOC_015604 NA non-coding upstream 913866 33899552 ~ 33908702 (+)

Expression



Co-expression Network