XLOC_015616


Basic Information

Item Value
gene id XLOC_015616
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 35146296 ~ 35215487 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033604
ACATCTCTAGTGCATCTAAACTGAATCTAGATAGCCTACAGAAAACTATCTTCCTAACAGCGAATTTAGCTATCATAGTGTAACAATAACAACCCAAAGTATTTTTTCTTTGCAACTTCAAGGAGGTAAGCCAAGGATATCAACCCAGCTGCATAAATAAGGAAAAAAGCCGTAAGCCTTTTCAGTACATTCCAGCTCTTTTagGCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033604 True 207 lncRNA 0.38 3 35146296 35215487

Neighbor

gene id symbol gene type direction distance location
XLOC_015615 cop1 coding upstream 9079 35116627 ~ 35137217 (+)
XLOC_015613 astn1 coding upstream 162041 34572690 ~ 34984255 (+)
XLOC_015614 NA coding upstream 323412 34822568 ~ 34822884 (+)
XLOC_015612 NA coding upstream 667418 34477999 ~ 34478878 (+)
XLOC_015611 NA coding upstream 706565 34439445 ~ 34439731 (+)
XLOC_015617 tnr coding downstream 24998 35240485 ~ 35474115 (+)
XLOC_015618 NA coding downstream 266669 35482156 ~ 35502933 (+)
XLOC_015619 FP236741.1 coding downstream 296515 35512002 ~ 35581291 (+)
XLOC_015620 mrps14 coding downstream 375936 35591423 ~ 35594184 (+)
XLOC_015621 cacybp coding downstream 379967 35595454 ~ 35601370 (+)
XLOC_015610 NA non-coding upstream 789627 34181145 ~ 34356669 (+)
XLOC_015606 dre-mir-27a non-coding upstream 1243841 33902325 ~ 33902455 (+)
XLOC_015623 NA non-coding downstream 397068 35612555 ~ 35614298 (+)
XLOC_015626 BX571812.1 non-coding downstream 615842 35831329 ~ 35831445 (+)
XLOC_015636 BX681417.2 non-coding downstream 877466 36092953 ~ 36094319 (+)

Expression


Co-expression Network