XLOC_015783


Basic Information

Item Value
gene id XLOC_015783
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 42013076 ~ 42013350 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033295
ccagtctgaggtcaagagcactctgaaacaggttttcattaaggatgtctgtacattgctgcattcatctttccctctatcctgactagtcttctagttactgctgctgaaaaacatcctccTACAGCATGATGCGGTGCccggttttctccaaacataacgcctggcattcactcaaaAGAGTTCAATTTCAGTCTCATCAGGCcaaagaattttgtttcttatggtctgagagtccttcagatgccttttggcaaattccaggcggggagtgg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033295 True 275 lncRNA 0.45 1 42013076 42013350

Neighbor

gene id symbol gene type direction distance location
XLOC_015781 odf3l2a coding upstream 79057 41926707 ~ 41934019 (+)
XLOC_015780 crlf1a coding upstream 92444 41876595 ~ 41920632 (+)
XLOC_015779 NA coding upstream 217507 41771111 ~ 41795569 (+)
XLOC_015778 NA coding upstream 430047 41578068 ~ 41583029 (+)
XLOC_015777 acvr1l coding upstream 469314 41524238 ~ 41543762 (+)
XLOC_015784 vcpip1 coding downstream 58881 42072231 ~ 42083513 (+)
XLOC_015785 crha coding downstream 99153 42112503 ~ 42114036 (+)
XLOC_015786 cyp7b1 coding downstream 122369 42135719 ~ 42152135 (+)
XLOC_015787 tmeff1a coding downstream 163572 42176922 ~ 42187118 (+)
XLOC_015788 cavin4a coding downstream 178242 42191592 ~ 42198600 (+)
XLOC_015776 NA non-coding upstream 764075 41230916 ~ 41249001 (+)
XLOC_015775 BX510333.1 non-coding upstream 976885 41036076 ~ 41036191 (+)
XLOC_015774 NA non-coding upstream 1027771 40983293 ~ 40985305 (+)
XLOC_015798 NA non-coding downstream 397538 42410888 ~ 42422644 (+)
XLOC_015799 BX005044.1 non-coding downstream 410334 42423684 ~ 42423799 (+)
XLOC_015800 BX294109.1 non-coding downstream 573388 42586738 ~ 42587035 (+)
XLOC_015802 NA non-coding downstream 603511 42616861 ~ 42624890 (+)
XLOC_015803 NA non-coding downstream 632038 42645388 ~ 42645994 (+)

Expression


Co-expression Network