XLOC_017993 (CU855900.1)



Basic Information


Item Value
gene id XLOC_017993
gene name CU855900.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 16883555 ~ 16883922 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00035473
ATAACAAGCTcgtacatatatttaaaaaaatttaatggaAATGAACTCATTTGAAAGTTAATCAACTGCGAACTAGATTGTCAAaaaatttaacagtattttatttattaagtttcaaAAGTTTTCCTAAATTAAAGTGTTAACAAATTGTCAAATATACCGTACCTTTGCGTCTACATCTGCCCCAAGCTGGACCAGACTCTCCACCATGGACAGATGTGACTGAACTCACCGCTGTAGTTAGGGAAGGT

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092606

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00035473 True 251 lncRNA 0.33 2 16883555 16883922

Neighbor


gene id symbol gene type direction distance location
XLOC_017992 NA coding downstream 21779 16853093 ~ 16861776 (-)
XLOC_017991 brms1lb coding downstream 34193 16830415 ~ 16849362 (-)
XLOC_017990 NA coding downstream 140256 16742002 ~ 16743299 (-)
XLOC_017989 ches1 coding downstream 334643 16477570 ~ 16548912 (-)
XLOC_017988 gtf2a1 coding downstream 429952 16437741 ~ 16453603 (-)
XLOC_017994 psma6b coding upstream 464 16884386 ~ 16906767 (-)
XLOC_017995 si:ch73-74h11.1 coding upstream 62210 16946132 ~ 16972446 (-)
XLOC_017996 si:dkey-5n18.1 coding upstream 154981 17038903 ~ 17041025 (-)
XLOC_017997 AL928808.1 coding upstream 373179 17257101 ~ 17259573 (-)
XLOC_017998 CU468139.1 coding upstream 758887 17642809 ~ 17642923 (-)
XLOC_017928 CU539064.1 misc downstream 6829854 10053405 ~ 10053701 (-)
XLOC_017987 BX890559.2 non-coding downstream 526195 16356267 ~ 16357360 (-)
XLOC_017981 BX842702.1 non-coding downstream 1157290 15725659 ~ 15726265 (-)
XLOC_017980 NA non-coding downstream 1249441 15631238 ~ 15634114 (-)
XLOC_017999 CR759908.1 non-coding upstream 900525 17784447 ~ 17784568 (-)
XLOC_018000 NA non-coding upstream 1132540 18016462 ~ 18019306 (-)
XLOC_018001 NA non-coding upstream 1306594 18190516 ~ 18195318 (-)
XLOC_018005 NA non-coding upstream 1503937 18387859 ~ 18388619 (-)

Expression



Co-expression Network