XLOC_018000


Basic Information

Item Value
gene id XLOC_018000
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 18016462 ~ 18019306 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036813
GGTAGATCTTCTCAACCCACAATGATACTTTATTGACCTTTTAATGCAATCCACACACCTTTTTCTCCTCACAGATGGCAGATGCTAACATGCTATGCTAATTCACTTCAGAGTTACTCCTCAGGGATTTTTTTCTCTGTGAGCAAGCGAGTAATATCAGTTCTTTCACCAGCCTCtaaaACTTTGTTTTCGATTTATAAGGGGATTAATTGATCCCGTTTCTTCTGTCTAATTAAACAGTttcctgtttattattttatatatagccTATTCATCGCCAGAGCTTGCAGCATTATTACCCACACAGCTAATaaagctgactcttaaagggataattcacagagaaattaaaaactttacattgttactcaccctcatgtcattacaACCCAGTGTGACTTTCCTTCTATCATTGAGAACCACAAGTTTAGCAGAAAATTAAAGCTGCTATACAACAAAGTGTAGCTGTGAGCAAAAGacatttaaaggaacagttcacccagaaatgtaaaTGTGCGCACTATTTACTCAAAGTCGTTTGAAACCTTTATCTTTATTATATCttattctgtcaaacacaaaagaagatattttgaagaatgttagaaacctgcaCTGACTTCCTTTGTAGgaaaaatgtatacttttgagGAAATTACCATTACGCAATTTTCAAAACATACTGGATACTGTGGCTAAAACATGGCAAAATTTGGTCTGTCATTGGAAATCTAGAATATTCAAAAACTTATCAAATACACAGATTAGACAGTCTTCACATGTGTGGTCATTCATTCGTATTTTATGACTAGACTAGTTTTTGTGCTGCTCTTAGACGTCTATTGGATTTTCACTGAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036813 True 858 lncRNA 0.35 2 18016462 18019306

Neighbor

gene id symbol gene type direction distance location
XLOC_017999 CR759908.1 coding downstream 231894 17784447 ~ 17784568 (-)
XLOC_017998 CU468139.1 coding downstream 373539 17642809 ~ 17642923 (-)
XLOC_017997 AL928808.1 coding downstream 756889 17257101 ~ 17259573 (-)
XLOC_017996 si:dkey-5n18.1 coding downstream 975437 17038903 ~ 17041025 (-)
XLOC_017995 si:ch73-74h11.1 coding downstream 1044016 16946132 ~ 16972446 (-)
XLOC_018001 NA coding upstream 171210 18190516 ~ 18195318 (-)
XLOC_018002 psma8 coding upstream 286816 18306122 ~ 18313864 (-)
XLOC_018003 gpr132b coding upstream 326212 18345518 ~ 18351510 (-)
XLOC_018004 vipas39 coding upstream 333464 18352770 ~ 18382892 (-)
XLOC_018005 NA coding upstream 368553 18387859 ~ 18388619 (-)
XLOC_017928 CU539064.1 misc downstream 7962761 10053405 ~ 10053701 (-)
XLOC_017993 CU855900.1 non-coding downstream 1132540 16883555 ~ 16883922 (-)
XLOC_017992 NA non-coding downstream 1154686 16853093 ~ 16861776 (-)
XLOC_017990 NA non-coding downstream 1273163 16742002 ~ 16743299 (-)
XLOC_018007 NA non-coding upstream 528984 18548290 ~ 18550782 (-)
XLOC_018008 NA non-coding upstream 546452 18565758 ~ 18569419 (-)
XLOC_018012 BX510941.1 non-coding upstream 917149 18936455 ~ 18942965 (-)

Expression


Co-expression Network