XLOC_018007


Basic Information

Item Value
gene id XLOC_018007
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 18548290 ~ 18550782 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036815
atgatcgcctcacagaaaaaaggttgctggtttgagccccggctgggtcagttggtttcCAGTTTCCCCATAAACATGAGGTACAggtaataaaggtGCTGGTATTGCTGTTCAATTCACTTTATGAATCTCAATGGACCAtgttttcagctaaaaatcttcaactggcttgaagTGTGATGGAACACAGGGCGTGATGGAAAACAGGGCTAGAAGTCAGATGTCGGAGGTTACAGCACCTCGCCTTCCTATTGGCTTAAGCTTGattatgaggatgatgatgatgtcacagCGAGCGTCCAGTGAAAGGAGATGCTGACATTCATATAGAGGCTCTGGGTGATCATCTCGCAGCCCAGGATCCAGCAAAACCCAGACCTCAGCCACTTGGCAGTCGGATTTTTCCAGTGGCTCTGTAACTTGACAAGGAGAGGTATCCATTTTGACACATATACCTCTGTGGatgttaatttttaaacactaaaGAGTCAGTGTCAGTTCAGCACAGCGATCACGCATTCCTActtcaaagaaaatgaaagattTGAGTTAAATTACCTACAAATTGCAGTCCAATAGCGAGTACCATTAATATGACAAGAATTGTAGTTAGTTACATAATAATCTGTCGACTTTTTAACTTTTAGACTACTTTTGACATAATCACACAACCTTGAATATCATTTTTTTGTACCATTTTGCTTCGAATGTAGTTCACTTCAGAGTTAAAAATCTGTCATGTTTAAAAACCCACT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036815 True 755 lncRNA 0.41 3 18548290 18550782

Neighbor

gene id symbol gene type direction distance location
XLOC_018006 cdc42bpb coding downstream 11816 18391860 ~ 18536474 (-)
XLOC_018005 NA coding downstream 159671 18387859 ~ 18388619 (-)
XLOC_018004 vipas39 coding downstream 165398 18352770 ~ 18382892 (-)
XLOC_018003 gpr132b coding downstream 196780 18345518 ~ 18351510 (-)
XLOC_018002 psma8 coding downstream 234426 18306122 ~ 18313864 (-)
XLOC_018008 NA coding upstream 14976 18565758 ~ 18569419 (-)
XLOC_018009 enpp5 coding upstream 170529 18721311 ~ 18736281 (-)
XLOC_018010 ccm2 coding upstream 223347 18774129 ~ 18794789 (-)
XLOC_018011 xkr6b coding upstream 250743 18801525 ~ 18915376 (-)
XLOC_018012 BX510941.1 coding upstream 385673 18936455 ~ 18942965 (-)
XLOC_017928 CU539064.1 misc downstream 8494589 10053405 ~ 10053701 (-)
XLOC_018001 NA non-coding downstream 352972 18190516 ~ 18195318 (-)
XLOC_018000 NA non-coding downstream 528984 18016462 ~ 18019306 (-)
XLOC_017999 CR759908.1 non-coding downstream 763722 17784447 ~ 17784568 (-)
XLOC_017998 CU468139.1 non-coding downstream 905367 17642809 ~ 17642923 (-)
XLOC_018014 NA non-coding upstream 619150 19169932 ~ 19174123 (-)
XLOC_018017 BX842692.1 non-coding upstream 831645 19382427 ~ 19385077 (-)
XLOC_018020 NA non-coding upstream 992361 19543143 ~ 19546588 (-)

Expression


Co-expression Network