XLOC_018023


Basic Information

Item Value
gene id XLOC_018023
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 19735774 ~ 19789010 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036822
tttgttgattttaggttggacgttgtaCATTGAAGTCAGCCTGACATttacgtcaacccgattttcatttccaaacaatatgcaacatccccacgacattggggtataacgtcaatctgacatcatgtttatgtcctgtgcctgctgggcattATTTAGAAACATCCATGTATGGGACTCTATAATGTGACAGCATTGCTATTAAAACAATATGCATAAATGAGGTTGTGACATGCCATTTAACACTTTTATCGTATTTTTCCAGCTCGGATGGCTTCATTTAGCTCAGCGCGCTGTCTGGTGTTCTTCTTCAGCTGTTCCATCATCTCCACATGCAGGGCTCGTGATGTGCTCTCCAGTCGAGTAGCGATGTCCGAGGCGGCACGCAACAGTTCTTCAAAGGTTTTACAAAGTGCTGTGATCAAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036822 True 426 lncRNA 0.43 2 19735774 19789010

Neighbor

gene id symbol gene type direction distance location
XLOC_018022 baalcb coding downstream 145396 19579835 ~ 19590378 (-)
XLOC_018020 NA coding downstream 189186 19543143 ~ 19546588 (-)
XLOC_018021 dre-mir-206-1 coding downstream 191028 19544648 ~ 19544746 (-)
XLOC_018019 BX276101.2 coding downstream 203117 19494273 ~ 19532657 (-)
XLOC_018018 snx17 coding downstream 224074 19436187 ~ 19511700 (-)
XLOC_018025 ptk2bb coding upstream 38369 19827379 ~ 19864131 (-)
XLOC_018026 kcnh5a coding upstream 175844 19964854 ~ 20182871 (-)
XLOC_018027 ppp2r5ea coding upstream 440576 20229586 ~ 20270191 (-)
XLOC_018028 si:ch211-212g7.6 coding upstream 485991 20275001 ~ 20312789 (-)
XLOC_018029 snapc1a coding upstream 525564 20314574 ~ 20324792 (-)
XLOC_017928 CU539064.1 misc downstream 9682073 10053405 ~ 10053701 (-)
XLOC_018017 BX842692.1 non-coding downstream 350697 19382427 ~ 19385077 (-)
XLOC_018014 NA non-coding downstream 561651 19169932 ~ 19174123 (-)
XLOC_018012 BX510941.1 non-coding downstream 792809 18936455 ~ 18942965 (-)
XLOC_018032 BX649231.1 non-coding upstream 639318 20428328 ~ 20582501 (-)
XLOC_018035 NA non-coding upstream 822882 20611892 ~ 20613628 (-)
XLOC_018036 NA non-coding upstream 892306 20681316 ~ 20690788 (-)
XLOC_018040 BX004766.1 non-coding upstream 1543004 21332014 ~ 21332128 (-)
XLOC_018043 BX296520.1 non-coding upstream 2210146 21999156 ~ 22015295 (-)

Expression


Co-expression Network