XLOC_018060



Basic Information


Item Value
gene id XLOC_018060
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 23194788 ~ 23196658 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036473
CGATTTCTTCCAACTCTGGGTTTACAGTATAATTATTTGGTCCACCAACACTTTCACCACTTGCGACAGGAGAAGGGTCAACACTTTGTTCAGTTGAATGCTTTATTTCACTTGATAAGGTAACTTCCTTCTTCTCCATAACTTGTCTAACAGTGGCCTCAAAACTACACCAAGAATAAATGCTAAAATCCTTAATTAAAAGTTCTGGTTGATTATCTTTTTCTTGTTGCAGTCACACTTCCATCTGTTGAAGGAGACATCAACTAAAGCATCCAGGTTCCGCAGGGACTGGTAGGCAGGGACAGGAACGGTGACCAGCAAGTTATAGCTCAGATCAAGGACCTGGAAAGAAATAGAAAGGCAATGAATTTTTTTGTGTCCCAAGTTTTAATGCAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036473 True 396 lncRNA 0.40 5 23194788 23196658

Neighbor


gene id symbol gene type direction distance location
XLOC_018059 spata18 coding downstream 23358 23160512 ~ 23171430 (-)
XLOC_018058 NA coding downstream 35290 23157083 ~ 23159498 (-)
XLOC_018056 NA coding downstream 111324 23081271 ~ 23083464 (-)
XLOC_018057 CU693368.1 coding downstream 112992 23081660 ~ 23081796 (-)
XLOC_018055 rasl11b coding downstream 168565 23022985 ~ 23026223 (-)
XLOC_018061 dcun1d4 coding upstream 7288 23203946 ~ 23226453 (-)
XLOC_018062 ociad1 coding upstream 48962 23245620 ~ 23254876 (-)
XLOC_018063 zar1 coding upstream 227156 23423814 ~ 23426339 (-)
XLOC_018064 slc10a4 coding upstream 234827 23431485 ~ 23440955 (-)
XLOC_018065 slain2 coding upstream 249585 23446243 ~ 23472319 (-)
XLOC_017928 CU539064.1 misc downstream 13141087 10053405 ~ 10053701 (-)
XLOC_018054 BX511028.1 non-coding downstream 284476 22910198 ~ 22910312 (-)
XLOC_018051 NA non-coding downstream 535366 22651976 ~ 22659422 (-)
XLOC_018074 NA non-coding upstream 991319 24187977 ~ 24188631 (-)
XLOC_018075 NA non-coding upstream 1038268 24234926 ~ 24272463 (-)
XLOC_018077 NA non-coding upstream 1251349 24448007 ~ 24454929 (-)
XLOC_018078 NA non-coding upstream 1532473 24729131 ~ 24732309 (-)
XLOC_018080 NA non-coding upstream 2111137 25307795 ~ 25311454 (-)
XLOC_018053 BX511028.2 coding downstream 153513 22869608 ~ 23041275 (-)

Expression



Co-expression Network