Item | Value |
---|---|
gene id | XLOC_018073 |
gene name | map3k7 |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007131.7 |
NCBI id | CM002904.2 |
chromosome length | 55201332 |
location | 24149794 ~ 24183382 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
map3k7 | Predicted to enable MAP kinase kinase kinase activity. Acts upstream of or within blood vessel morphogenesis. Human ortholog(s) of this gene implicated in frontometaphyseal dysplasia 2 and prostate cancer. Orthologous to human MAP3K7 (mitogen-activated protein kinase kinase kinase 7). |
id | name | namespace |
---|---|---|
GO:0048514 | blood vessel morphogenesis | biological_process |
GO:0007254 | JNK cascade | biological_process |
GO:0006468 | protein phosphorylation | biological_process |
GO:0043123 | positive regulation of I-kappaB kinase/NF-kappaB signaling | biological_process |
GO:0016310 | phosphorylation | biological_process |
GO:0007165 | signal transduction | biological_process |
GO:0016740 | transferase activity | molecular_function |
GO:0005524 | ATP binding | molecular_function |
GO:0004672 | protein kinase activity | molecular_function |
GO:0016301 | kinase activity | molecular_function |
GO:0004709 | MAP kinase kinase kinase activity | molecular_function |
GO:0000287 | magnesium ion binding | molecular_function |
id | description |
---|---|
ko04010 | MAPK signaling pathway |
ko04013 | MAPK signaling pathway - fly |
ko04310 | Wnt signaling pathway |
ko04064 | NF-kappa B signaling pathway |
ko04668 | TNF signaling pathway |
ko04152 | AMPK signaling pathway |
ko04140 | Autophagy - animal |
ko04214 | Apoptosis - fly |
ko04520 | Adherens junction |
ko04613 | Neutrophil extracellular trap formation |
ko04620 | Toll-like receptor signaling pathway |
ko04624 | Toll and Imd signaling pathway |
ko04621 | NOD-like receptor signaling pathway |
ko04622 | RIG-I-like receptor signaling pathway |
ko04660 | T cell receptor signaling pathway |
ko04657 | IL-17 signaling pathway |
ko04380 | Osteoclast differentiation |
ko05170 | Human immunodeficiency virus 1 infection |
ko05161 | Hepatitis B |
ko05171 | Coronavirus disease - COVID-19 |
ko05162 | Measles |
ko05168 | Herpes simplex virus 1 infection |
ko05169 | Epstein-Barr virus infection |
ko05130 | Pathogenic Escherichia coli infection |
ko05132 | Salmonella infection |
ko05131 | Shigellosis |
ko05135 | Yersinia infection |
ko05145 | Toxoplasmosis |
ko05140 | Leishmaniasis |
ko05417 | Lipid and atherosclerosis |
ko05418 | Fluid shear stress and atherosclerosis |
ko01001 | Protein kinases |
id | description |
---|---|
ZDB-GENE-041001-135 | Predicted to enable MAP kinase kinase kinase activity. Acts upstream of or within blood vessel morphogenesis. Human ortholog(s) of this gene implicated in frontometaphyseal dysplasia 2 and prostate cancer. Orthologous to human MAP3K7 (mitogen-activated protein kinase kinase kinase 7). |
ensembl_id | ENSDARG00000020469 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00035612 | False | 4689 | mRNA | 0.41 | 17 | 24149794 | 24182689 |
TCONS_00035613 | False | 4042 | mRNA | 0.44 | 16 | 24151004 | 24183333 |
TCONS_00035614 | False | 870 | mRNA | 0.48 | 6 | 24152512 | 24165509 |
TCONS_00035615 | False | 915 | lncRNA | 0.47 | 5 | 24152678 | 24159764 |
TCONS_00035616 | False | 871 | nonsense_mediated_decay | 0.49 | 9 | 24152799 | 24172140 |
TCONS_00035617 | False | 909 | lncRNA | 0.45 | 7 | 24171668 | 24181988 |
TCONS_00035618 | True | 820 | mRNA | 0.51 | 5 | 24181798 | 24183382 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_018072 | bach2b | coding | downstream | 26913 | 23972948 ~ 24122881 (-) |
XLOC_018071 | mdn1 | coding | downstream | 203498 | 23877299 ~ 23946296 (-) |
XLOC_018070 | katna1 | coding | downstream | 273503 | 23860858 ~ 23876291 (-) |
XLOC_018069 | si:dkey-15j16.6 | coding | downstream | 297620 | 23847380 ~ 23852174 (-) |
XLOC_018068 | si:dkey-15j16.3 | coding | downstream | 307163 | 23838814 ~ 23842631 (-) |
XLOC_018074 | NA | coding | upstream | 4595 | 24187977 ~ 24188631 (-) |
XLOC_018075 | NA | coding | upstream | 51544 | 24234926 ~ 24272463 (-) |
XLOC_018076 | CR385053.3 | coding | upstream | 252289 | 24435671 ~ 24443680 (-) |
XLOC_018077 | NA | coding | upstream | 264625 | 24448007 ~ 24454929 (-) |
XLOC_018078 | NA | coding | upstream | 545749 | 24729131 ~ 24732309 (-) |
XLOC_017928 | CU539064.1 | misc | downstream | 14096093 | 10053405 ~ 10053701 (-) |
XLOC_018060 | NA | non-coding | downstream | 953136 | 23194788 ~ 23196658 (-) |
XLOC_018058 | NA | non-coding | downstream | 990296 | 23157083 ~ 23159498 (-) |
XLOC_018056 | NA | non-coding | downstream | 1066330 | 23081271 ~ 23083464 (-) |
XLOC_018057 | CU693368.1 | non-coding | downstream | 1067998 | 23081660 ~ 23081796 (-) |
XLOC_018054 | BX511028.1 | non-coding | downstream | 1239482 | 22910198 ~ 22910312 (-) |
XLOC_018080 | NA | non-coding | upstream | 1124413 | 25307795 ~ 25311454 (-) |