XLOC_018078


Basic Information

Item Value
gene id XLOC_018078
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 24729131 ~ 24732309 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036476
attaaaacctGTGCATGAGTGAAATAAATCTGCTGATGGTAATTATTTGCAAATGATCTTGCAAGCAGATTCAGAGAGGCCCAGATGATATGAAAATCAGAGGAGGCTGTTGCCAACTACATCTCTCACAGGTGACCAATCAATTGAGTGCTCATACACTGCTCAATTACCTCACCCGCTGACCTATAGATCTACCAACAGTGCCCTGTCAACCCACTGATTGCCAGAACCTGCACACAGAACATTAGCTCAATTGTTTTAATAAAGCATTGCTCAAAACACCCGCAGACTGCTGTGAATACATAGTTCAATCCTACTTTTTCTCAGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036476 True 328 lncRNA 0.42 2 24729131 24732309

Neighbor

gene id symbol gene type direction distance location
XLOC_018077 NA coding downstream 274202 24448007 ~ 24454929 (-)
XLOC_018076 CR385053.3 coding downstream 285451 24435671 ~ 24443680 (-)
XLOC_018075 NA coding downstream 456668 24234926 ~ 24272463 (-)
XLOC_018074 NA coding downstream 540500 24187977 ~ 24188631 (-)
XLOC_018073 map3k7 coding downstream 545749 24149794 ~ 24183382 (-)
XLOC_018079 epha7 coding upstream 84809 24817118 ~ 24963092 (-)
XLOC_018080 NA coding upstream 575486 25307795 ~ 25311454 (-)
XLOC_018081 itsn2a coding upstream 626755 25359064 ~ 25436389 (-)
XLOC_018082 mrpl19 coding upstream 708205 25440514 ~ 25445246 (-)
XLOC_018083 si:dkey-183n20.15 coding upstream 740747 25473056 ~ 25486384 (-)
XLOC_017928 CU539064.1 misc downstream 14675430 10053405 ~ 10053701 (-)
XLOC_018060 NA non-coding downstream 1532473 23194788 ~ 23196658 (-)
XLOC_018058 NA non-coding downstream 1569633 23157083 ~ 23159498 (-)
XLOC_018088 BX322665.2 non-coding upstream 867796 25600105 ~ 25605285 (-)
XLOC_018092 CR352243.2 non-coding upstream 978482 25710791 ~ 25712415 (-)
XLOC_018102 BX470119.1 non-coding upstream 1387030 26119339 ~ 26119459 (-)
XLOC_018103 BX470119.2 non-coding upstream 1462417 26194726 ~ 26194841 (-)

Expression


Co-expression Network