XLOC_018092 (CR352243.2)


Basic Information

Item Value
gene id XLOC_018092
gene name CR352243.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 25710791 ~ 25712415 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035653
GAAGAGTTTCTCCACCAGTGGCAGACTCTCGATGGCCAGCGGCTGCCTGTAGCCCAGCTGATCCAAGCGCTTCCGCAGATTGATGAACTTCCGCTCTGCGTTGGTCGTCATGGTCATTCAACACAAATACGCGCTCCGCTCTACAAGCAAAGTGATTCACATGTCAACAACAGATTTAACAAAGACCTTTTACATCTTCTTATCTTATACTTTCATCGTTTGCCGTGTATTGAAACCTATGCGCTGCCAAATCAGACAGCACTTTTGGACGCATTGGCAACATTCTATTTCCTCCCCTCCCCGCGGTGAATGGTCTTCCGGTGGCGGTAACACTGCTTGAAAATGGCGCCGAGGAGAAAGGAAAGACCACAGTCCTGCTCAAGTGCCGTCAAACTGGAACCTGAGAAACAGCGACATTTAGTGGACGTTGAGTAGTAAACGGTATAAAAAAAGTGATCACAACTGCTTTTACTCATGTAAATTCAGTGCAATTATAATTGAACATGTAAAGTCAGACCTTTCCCCATGGGAACAGTGTATTGAACCTTTAGACAAAAACTCAATCCTCTTATGTGCTttgcatcatttttaataaatcaggTGCTTTGCCCATTTAGCACGATTGCCTATTTTTTAGCAAACTATTGGaggaaaaacacacattttatttaGGAGCACAAACTGAACAAATATAACGTTATACTTTCATGCATTTGTTTATCATACATGTTTATGTTTACAGATTACATAAATAATTGCATATAAATATCTGTTACAATCACTCTATCATCTTCCAACAATATTATCAATACATAATATATGATGAGgctacatggtggctcagtagttagcactgtcgccttatagCCAGAaagttgctagttcgagtcccgactgggtcagttggcaactctgtgtggagtttgcatgttctccccatgttagcttaggtttcctcctggtgctccggttttccccacagtccaaatagacaattttgaggaatgtaaacaaaaacaatggccccaatttatttcctgttttacatttttaatttatagaGCTTCCGAGAacccaaaaagagccacatattgataaattatgttatgatagctgttttaacattacattatgattaaattgccttttACAGTTCGGAAATAATTTGCTAACCAGCAGGAAAATTTCATGGGCCAAAGACATCactacattgaaatggtctatagatgaattgaatgaactaaatttgccaaatagcgtatgagtgtgaataaatgtga

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097729

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035653 True 1280 lncRNA 0.39 2 25710791 25712415

Neighbor

gene id symbol gene type direction distance location
XLOC_018091 CRACD coding downstream 1442 25659839 ~ 25709349 (-)
XLOC_018090 si:dkeyp-117h8.4 coding downstream 65641 25639470 ~ 25645150 (-)
XLOC_018089 paics coding downstream 79535 25618114 ~ 25631256 (-)
XLOC_018088 BX322665.2 coding downstream 105506 25600105 ~ 25605285 (-)
XLOC_018087 cyp2ad3 coding downstream 159115 25548425 ~ 25551676 (-)
XLOC_018093 chst14 coding upstream 27564 25739979 ~ 25748407 (-)
XLOC_018094 exoc1 coding upstream 140597 25853012 ~ 25878607 (-)
XLOC_018095 elmsan1a coding upstream 174076 25886491 ~ 25902141 (-)
XLOC_018096 churc1 coding upstream 217025 25929440 ~ 25934439 (-)
XLOC_018097 capn3b coding upstream 242703 25955118 ~ 26001290 (-)
XLOC_017928 CU539064.1 misc downstream 15657090 10053405 ~ 10053701 (-)
XLOC_018080 NA non-coding downstream 399337 25307795 ~ 25311454 (-)
XLOC_018078 NA non-coding downstream 978482 24729131 ~ 24732309 (-)
XLOC_018077 NA non-coding downstream 1255862 24448007 ~ 24454929 (-)
XLOC_018075 NA non-coding downstream 1438328 24234926 ~ 24272463 (-)
XLOC_018102 BX470119.1 non-coding upstream 406924 26119339 ~ 26119459 (-)
XLOC_018103 BX470119.2 non-coding upstream 482311 26194726 ~ 26194841 (-)
XLOC_018107 NA non-coding upstream 733488 26445903 ~ 26458381 (-)
XLOC_018112 NA non-coding upstream 918655 26631070 ~ 26708526 (-)
XLOC_018116 BX248515.2 non-coding upstream 1247118 26959533 ~ 26962756 (-)

Expression


Co-expression Network