XLOC_018170



Basic Information


Item Value
gene id XLOC_018170
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 30465502 ~ 30466038 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00036866
TGAGCCAATTGCATAGCAGCCTGTGTGAggcacggtgtgtgtgtgtgtgtgtgcgcgtgtgtgttaaAAATAACAGCTCTCCCACTTCATGACTCATTCTATGAGCTCTCTGTCCGACACTCCCAAACAGTGTCTGGAAAGAAACCCTAGAGCCAGCACCTTCATTTACTGACTGGTCATTCCTTACTGTCTCTATGCGTGTGTGCTGCTATACGTTTTATATAAATATCTTCATAGCTGGTCGGTATGTGCAAGATTTGCTGCTCCGCTGAAGCCCTGTTATATGATGTTGTTATGTAACTTTTCACAGGGCTGGTCGACAATGACAAGCGAAGGTGAGAACGACAGATGGAACACAGATGCCACCAGTGCGTGCATGATTTAGAGAACGGACAAACTGTGGGAGACGAGCAAAACTGCTAAAATTCATGATTTCGGAGCTGTTTACAAATCTGCAGAGGAGAGTTGTTGATCCTTGATGTCATTTACCAGGCatgcattgcaaaaaaaaaaaaaaatcttaaaaatataatgaaa

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00036866 True 537 lncRNA 0.43 1 30465502 30466038

Neighbor


gene id symbol gene type direction distance location
XLOC_018165 rps7 coding downstream 88281 30372352 ~ 30377221 (-)
XLOC_018169 BX276180.3 coding downstream 90596 30374686 ~ 30374906 (-)
XLOC_018168 BX276180.1 coding downstream 91418 30373865 ~ 30374084 (-)
XLOC_018167 BX276180.2 coding downstream 92075 30373207 ~ 30373427 (-)
XLOC_018166 BX276180.4 coding downstream 92619 30372663 ~ 30372883 (-)
XLOC_018171 NA coding upstream 334830 30800868 ~ 30806474 (-)
XLOC_018172 hebp2 coding upstream 428055 30894093 ~ 30901034 (-)
XLOC_018173 kif25 coding upstream 436100 30902138 ~ 30920356 (-)
XLOC_018174 acat2 coding upstream 456557 30922595 ~ 30931146 (-)
XLOC_018175 wtap coding upstream 465376 30931414 ~ 30938246 (-)
XLOC_017928 CU539064.1 misc downstream 20411801 10053405 ~ 10053701 (-)
XLOC_018163 NA non-coding downstream 206929 30123490 ~ 30258573 (-)
XLOC_018176 NA non-coding upstream 499845 30965883 ~ 30973173 (-)
XLOC_018177 NA non-coding upstream 536150 31002188 ~ 31067306 (-)
XLOC_018178 AL929014.1 non-coding upstream 579037 31045075 ~ 31045205 (-)
XLOC_018183 NA non-coding upstream 1091830 31557868 ~ 31744506 (-)

Expression



Co-expression Network