XLOC_018185 (adgb)


Basic Information

Item Value
gene id XLOC_018185
gene name adgb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 31929377 ~ 32007209 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035838
TGCGTGATGACGCAATAACGCGATGAGTTAAAGGGTAAGTGATTCAGTTATTTTGGAATCGATTCTCTGAACTGAACTGTTTGAAAAACGAGTCTGTTCCCAATTCCCATCGCCAAACACCAGAGAATAGACTCAGGGGTTTGTTTGAGCAGGTCAGGAGGAGTTCATTGGCACGAGGAGGTAATAAAGCTCTGAGCTGCGCTCGAGCTGTCGGCAATCCCGAGCGGGCCTGTCGCCTAGCAACATAGCAAACTTTCCTTGCTGACTGAGTGTCACCCTGGGCATCGCTTCCTATTCATCATTATCTTTTGTGCTTTAATCAGCCAAGTGTTCCTTCAGATCATGAACTCTTAGAATAAGAAATAAGACCTACATACGCTTGCAATGTCGAAGACACCCAAGAAAAAGGCGTCCGCCTCCAGCCTCGTCGCTTCTTCGCCCGGACACTCTCCCAAAAAAGAAGCATCATCGTTGGTTGGTGCATCAGAAAGTCCTGTAGAGTCAAAAAAGAGTCTCATTTCTCTCTGGCCGGAGTGGAATGACACAGATGTCAATGCAGAAAAATGGGATGCACCTAAAACCCCCAAGGATAGCAAGCTCTTCGATGACCCAGAAGGGAAGGTTGAACTTCCTTCTTCCTTGAGGATACACACTTGGAAACGACCTTCAGAGTTCATACTTAAAAAGaTTCCAGTTGTGGTGGAAAATGCAGATACTTTTGACCTCACCTCAGCAAATGAGCATTTATTCTCAAGTGAGCTCATGCGATGGATCATTAGTGAGTGCCACATTCTGTGGAAAGTCTGCAACACCAGAGAGGACAAAGTCGTCTCCACAGAAACAGTTCCCACCCTTTGGAAACCCTGGGAACACATCTACTCCCTGTGCAAAGCAGGAAAGGACCACATGCCCTTATATAACACCTATGGGAAGTATGTCATTAAACTGTACTGGCTGGGAAGTTGGAGGAAGATTACTGTTGATGACATGTTACCCTTTGACAAGGATAATAATCTGCTGCTTCCTGCTACCACAAACCAATCCGAGCTATGGCCTATGCTGTTGGCAAAAGGCATACTAAAGGTAGCCAGTACTGATACTCCAGTCTCAGGCTCCGGGAGAGAGTTTGGAGAGTTTACGATCATCCACTGTCTCACTGGATGGATACCGGAGATGATTCCTTTAAAATCCTGGTATACAGGCAAGATTTGGGATTTTCTGAGGGACAATGTTGCTCAGTTCCAGTTGGAGGAAGAGAGCTCAGAAGAGAAGATCACAATTACTGATTCTAATGTGAACAATGTTCAAAGCAAATCTCCAAAGAGCAGAGCCACTGGTTCTGTTCCTCAGATAGTAGTGTGTGCCAGTTACCAGCCCTTGCACCTAATGGAGAAAAGAACCTCAATGCTCACGAGGATGGCTGATTCGTCTGAGAGTCTGAGGCAGTATGGGCTATCTCAGCTCTTCAGTCACCCAGTGCTTCTCACCTGCACTCGAGACTGTCCTCTAGTGGCCCCTCCTAAAACACCTCCACTGCCTCAATGGAAACTCATCCGGCCTCGCAAGCAGACTAACATTACTGATGAGCCCAAGGAACCCCCTGTTCAGAAACCAGAGCAGTTCATTGAGGTTTCCAGCCCATTCATCAACTTCAAACTCATGACCATGAGTGCACATGATATgGAGCATGGAGGTTTAAAGAAGCGCATGTATAATTCTAATCTGACTTCATTTTCTGAAATGGAAGATACTGAAGATGAACACATTCAAAATGACAACATCCAGAACAGCACAAATACACTGCAAACCAATGAAAACACCCAGGTACCAGCAGAGGACAAGAAAAAGGACAACAGCATCGCCAATGAAGGAGTGGAGTCAACTGCAGCCCCTGacaaagagacagacagaaaagatAAGGAGAAAGTACAGACTGGTAAGGAGTCCAGTGCTGGTTTGCTTCAGTCCCAGGATGCATTAGCTTCAAACAAACCGCTGCTGCTGAAGACCTGGGTGGACCTGCACAACTTCACTAAATGCTTCCAGACACTGCTGATTTTCCACAAGCCAAACATGTATCCGCATCAGTTCAAAACATCACACTTTACGAACTCCATCTCCTCTCGACTGTCTGCTGCTGCATTGTCCTACACTGTGGCCTCCACCCACTCTGTGGCTGCTCTTCCTAAACAATCTGATTTGACTGGAAATATtcacacacagTCTGCAGATGGAAAAGGTACTTACTTCCTGTTTGCAGATAACCTGTTATCCACAGAGATTGTCATCGGTTTCTCAGCTTTAGTGCACTGGGGAGAAAGTGTGGAAGAGAGAAAGGAGTCCTCAACCAGGCCTGGTTCTCTAACAGCAAAGCCTTTTTCATGGAAAAGCATCATCTCTAAACTTCCTGTGGTGCAGATCCAAACCACTGCTTGTAAAGCTGTGCTTCTCTCCCTTCCCCCTGGGCGCCATGTGCTTCAGGTGCACACTAATGCTTCATTGGCCGTCCACCTACATCTCTGCAGCAAGTTTCCTTTTGTGTTTGGTGATGAAGAAACTGTCATGCCATACCTTGACAAGGAAAGTCTGAGATTCTGTGAACAGGCTGTGACAATTGTGAGAGCTCTGGGTTGTGTAATTAGCTGCTTTTCTGATCCAGAGGAACTACCATTGACCACCAAAGAACTTGAGAAAGCACATGGCATGGGCATAAAGCAGCAAAGGGTGTTCAGTGAGGCAGTCTATCATATGTTCTTCTCTGCCCTGGGACGGAAACTGACATCTGAGGAGCTGTTTGCGGTACAAACGCTGACTGGAGACCCATCACCACATGGCAGCAATGAAAAACTCTTGGAAGCACGATCAGCAGATGAGACTCCAGAGGGCTGGACTGGCAGGCAGGCCACAGACAAGGAAATGCAGGCAGCAATAGTCCTGCAGGCCGGATGGAAGGGATACCTAGTTAGAGAGATCCTCACTGCAGCAAGACCAGGCACCAAGGAAAATGTGATCGTCGCTAAGACTCTGCAAGAGATGTGGGCTTCTGTGGAATCAGATGTAGAGAAGCATGCCGTATCTTTACTGAGACACATGGTCACTAATGGTGAAGGAATAGCAGAGCTGTACCCCTGTAGAGAGGATGAGTGCAACAGAATAACATTCACTGACTACTCAGTGCCTGTACCAGAGACGACAAACTCCTGGATTCTGATCTTCAGGGAGGTGTTTCGAGTTTCTAAGAACATGCTACTTGTTCCTAAAATGTTCTCCCCTATTCCTGTATGTATTTTGCACGTCATCAATAATGACACATTAGAGAAGATACCAAGAGTCTTTAACAATGTGGAGCCATACATGTATACACCGAACAAGGGTGGTTATACATTTGTTGCCGAGGCACATACAGGAGACGTACCTGTGATTGGAGGAAAATGGCGAATGCGGCTGATTGGCTCTCGAGAACCCTTACCATTGCTTGCCAGAGGAGCACCATGCAATGACTTTTCTGTCAAAGAGTTGAAGGGTTACTACATCCCTAATCAAAAGAACATCATCTGCAGACATGTGGTTAAAGTCTCCAGTGATCACAAGGCTACTGTACAGTGTCAGACCTCTAAATCAGATGTTTACATTAAACTGAGCATCCTGGACCATGAGAAAGAGGTCGCTAGCTGTCAGGGCAAAGGGCATGTCATCATCCCTGTCTACTGCTTTTTAGCCAGCAATGGCAGTTCTGTGGCCCAGGCGGAGGCAAGGCAGGATCAGGGCAGCCTTACAGCAGAAGAGAGAGTGACAGGAGCGGGTGGAGGAAAGGAAGGCAATGACCAACACCCTACAGACACACTGTTTCATAAGTATTACATACAGGCGGAGGTGTTACAGGAGAGTTGGCCTCTAGATGAAGCTCTCTCATCCTTCATACAGAAGCTTAGAGATGAGGAGCGCAATGAAATGAGAGTGTTTGGAGATATTCTGGATGGCACATCTATGCCTGTGGGTACAGACCAACAAAACAGAGAGGGTCAGAAATCTACTCCCAAATCAACCCACAAGGCCAAggaaaaagaaaaggacaaaGACAAATTAGCATTAAAGTCGAGCTCCATTATGGACCTGaaCTTGGATGTAAGTAAGCCTCACTGGACTCTGCGTGTGGTGAGTGACCAGAGTGAAGCAGGAAATATAGAAGTAAAGAAAGACACTGAGAGACTGGAGGAGATCAGAGCCATGAAACTGGCCTGGGAATCAGCTGAGCCTGGAAGAGCAGTGAAGGCTCATCAGTCTCGACTGCGTTATCTCAAAGTGCTGGAGGAACGTGCAGAGAGTAAAGGACCTGCTGACACAGGCACACAGCCTCAGTCCAAACAAAGTGGAGAATTCACAAAGAAAGCTGACAAAAAAGATATTGATTATACACCATATATCAGGAAGTCTTTGCCACAGCCTCGTCTGAAGAATGAAGAGGTCGAGGAGGAGCAAAGAAGGGAACGTTCTGAAAAATTCCAAAGTTTCCGTCTGATCTGGGACAATATTCTGGAACAGCGGAAACAGGAAAAAACTGCACGTAAGGAAATGATGAAGCGACAGATGGAGACCTGCATCGGCTTTCAGgatacTATGGATGCATATCGGCAAAAGATGCTGGAGGCTCGTGAGGCATTCCAGTCCTGCATCCTGAAGGAACAGCCACGTAAGAAAATGGAGGAGAAACCTATGGAAACAGTTGAGCAGGTTGAGACAGAAAGCAAAACTACTGTGGTCCAGCAAAGTGGACGTAAGAACGAGGGCAAAAGGAAGTGATCATTCCCTCATTTTATTGATGTTCTTCTTTTTTATGAAGAAtattatcttaaaaatataaggaTTCCTTTGTAATAAGTGAATCCAGTTTGTAAGATTAGCATGCAGGGTCGCCTCTCGCTGTCAGGTTATCTTGCTCTGTGATTCTTTATTTAAATGGGTACTGTCAGGATTGATCCGAGTAGCTCTGAATGATAGCCTGTCTCGTCACGACAGATTTTGCTTCCCAGAAGACTTAAAAGAGTATTTCGGGAATATTGTAGTTCTTACGTACTTGCTTATTGCTAGATGCCAGTTTATTACAGCTTTTAAAGAtccaattagattttttttccatgCATTGTTTCTGATTTTTTGCTTGTTGTACTGTAGTTCAAGATACAGCACTGATGCTAAATAAAATGAGATgatcacaaagaaatgccaatgtAATTTGAttaaacaataacataaaataataaaacaaacacttcATGAATCTCCAATAAATTGTTACTTTTATTAAAGGACTAA
>TCONS_00036877
GGAGAAAGTACAGACTGGTAAGGAGTCCAGTGCTGGTTTGCTTCAGTCCCAGGATGCATTAGCTTCAAACAAACCGCTGCTGCTGAAGACCTGGGTGGACCTGCACAACTTCACTAAATGCTTCCAGACACTGCTGATTTTCCACAAGCCAAACATGTATCCGCATCAGTTCAAAACATCACACTTTACGAACTCCATCTCCTCTCGACTGTCTGCTGCTGCATTGTCCTACACTGTGGCCTCCACCCACTCTGTGGCTGCTCTTCCTAAACAATCTGATTTGACTGGAAATATtcacacacagTCTGCAGATGGAAAAGGTACTTACTTCCTGTTTGCAGATAACCTGTTATCCACAGAGATTGTCATCGGTTTCTCAGCTTTAGTGCACTGGGGAGAAAGTGTGGAAGAGAGAAAGGAGTCCTCAACCAGGCCTGGTTCTCTAACAGCAAAGCCTTTTTCATGGAAAAGCATCATCTCTAAACTTCCTGTGGTGCAGATCCAAACCACTGCTTGTAAAGCTGTGCTTCTCTCCCTTCCCCCTGGGCGCCATGTGCTTCAGGTGCACACTAATGCTTCATTGGCCGTCCACCTACATCTCTGCAGCAAGTTTCCTTTTGTGTTTGGTGATGAAGAAACTGTCATGCCATACCTTGACAAGGCATGTCTGAGATTCTGTGAACAGGCTGTGACAATTGTGAGAGCTCTGGGTTGTGTAATTAGCTGCTTTTCTGATCCAGAGGAACTACCATTGACCACCAAAGAACTTGAGAAAGCACATGGCATGGGCATAAAGCAGCAAAGGGTGTTCAGTGAGGCAGTCTATCATATGTTCTTCTCTGCCCTGGGACGGAAACTGACATCTGAGGAGCTGTTTGCGGTACAAACGCTGACTGGAGACCCATCACCACATGGCAGCAATGAAAAACTCTTGGAAGCACGATCAGATGAGACTCCAGAGGGCTGGACTGGCAGGCAGGCCACAGACAAGGAAATGCAGGCAGCAATAGTCCTGCAGGCCGGATGGAAGGGATACCTAGTTAGAGAGATCCTCACTGCAGCAAGACCAGGCACCAAGGAAAATGTGATCGTCGCTAAGACTCTGCAAGAGATGTGGGCTTCTGTGGAATCAGATGTAGAGAAGCATGCCGTATCTTTACTGAGACACATGGTCACTAATGGTGAAGGAATAGCAGAGCTGTACCCCTGTAGAGAGGATGAGTGCAACAGAATAACATTCACTGACTACTCAGTGCCTGTACCAGAGACGACAAACTCCTGGATTCTGATCTTCAGGGAGGTGTTTCGAGTTTCTAAGAACATGCTACTTGTTCCTAAAATGTTCTCCCCTATTCCTGTATGTATTTTGCACGTCATCAATAATGACACATTAGAGAAGATACCAAGAGTCTTTAACAATGTGGAGCCATACATGTATACACCGAACAAGGGTGGTTATACATTTGTTGCCGAGGCACATACAGGAGACGTACCTGTGATTGGAGGAAAATGGCGAATGCGGCTGATTGGCTCTCGAGAACCCTTACCATTGCTTGCCAGAGGAGCACCATGCAATGACTTTTCTGTCAAAGAGTTGAAGGGTTACTACATCCCTAATCAAAAGAACATCATCTGCAGACATGTGGTTAAAGTCTCCAGTGATCACAAGGCTACTGTACAGTGTCAGACCTCTAAATCAGATGTTTACATTAAACTGAGCATCCTGGACCATGAGAAAGAGGTCGCTAGCTGTCAGGGCAAAGGGCATGTCATCATCCCTGTCTACTGCTTTTTAGCCAGCAATGGCAGTTCTGTGGCCCAGGCGGAGGCAAGGCAGGATCAGGGCAGCCTTACAGCAGAAGAGAGAGTGACAGGAGCGGGTGGAGGAAAGGAAGGCAATGACCAACACCCTACAGACACACTGTTTCATAAGTATTACATACAGGCGGAGGTGTTACAGGAGAGTTGGCCTCTAGATGAAGCTCTCTCATCCTTCATACAGAAGCTTAGAGATGAGGAGCGCAATGAAATGAGAGTGTTTGGAGATATTCTGGATGGCACATCTATGCCTGTGGGTACAGACCAACAAAACAGAGAGGGTCAGAAATCTACTCCCAAATCAACCCACAAGGCCAAggaaaaagaaaa
>TCONS_00036485
GTAGTGTGTGCCAGTTACCAGCCCTTGCACCTAATGGAGAAAAGAACCTCAATGCTCACGAGGATGGCTGATTCGTCTGAGAGTCTGAGGCAGTATGGGCTATCTCAGCTCTTCAGTCACCCAGTGCTTCTCACCTGCACTCGAGACTGTCCTCTAGTGGCCCCTCCTAAAACACCTCCACTGCCTCAATGGAAACTCATCCGGCCTCGCAAGCAGACTAACATTACTGATGAGCCCAAGGAACCCCCTGTTCAGAAACCAGAGCAGTTCATTGAGGTTTCCAGCCCATTCATCAACTTCAAACTCATG
>TCONS_00036878
GAGTCAAAAAAGAGTCTCATTTCTCTCTGGCCGGAGTGGAATGACACAGATGTCAATGCAGAAAAATGGGATGCACCTAAAACCCCCAAGGATAGCAAGCTCTTCGATGACCCAGAAGGGAAGGTTGAACTTCCTTCTTCCTTGAGGATACACACTTGGAAACGACCTTCAGAGTTCATACTTAAAAAGaTTCCAGTTGTGGTGGAAAATGCAGATACTTTTGACCTCACCTCAGCAAATGAGCATTTATTCTCAAGTGAGCTCATGCGATGGATCATTAGTGAGTGCCACATTCTGTGGAAAGTCTGCAACACCAGAGAGGACAAAGTCGTCTCCACAGAAACAGTTCCCACCCTTTGGAAACCCTGGGAACACATCTACTCCCTGTGCAAAGCAGGAAAGGACCACATGCCCTTATATAACACCTATGGGAAGTATGTCATTAAACTGTACTGGCTGGGAAGTTGGAGGAAGATTACTGTTGATGACATGTTACCCTTTGACAAGGATAATAATCTGCTGCTTCCTGCTACCACAAACCAATCCGAGCTATGGCCTATGCTGTTGGCAAAAGGCATACTAAAGGTAGCCAGTACTGAGCTCCGGGAGAGAGTTTGGAGAGTTTACGATCATCCACTGTCTCACTGGATGGATACCGGAGATGATTCCTTTAAA

Function

symbol description
adgb Predicted to enable calcium-dependent cysteine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Is expressed in olfactory placode and peripheral olfactory organ. Orthologous to human ADGB (androglobin).

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004198 calcium-dependent cysteine-type endopeptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041001-205 Predicted to enable calcium-dependent cysteine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Is expressed in olfactory placode and peripheral olfactory organ. Orthologous to human ADGB (androglobin).

Ensembl:

ensembl_id ENSDARG00000005595

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035838 False 5313 mRNA 0.45 35 31929377 32007209
TCONS_00036877 False 2148 lncRNA 0.47 17 31936024 31967211
TCONS_00036485 False 309 lncRNA 0.51 3 31981452 31983851
TCONS_00036878 True 675 lncRNA 0.45 6 31996190 32004402

Neighbor

gene id symbol gene type direction distance location
XLOC_018184 stxbp5a coding downstream 23409 31745949 ~ 31905968 (-)
XLOC_018183 NA coding downstream 184871 31557868 ~ 31744506 (-)
XLOC_018182 sash1a coding downstream 185560 31428819 ~ 31743817 (-)
XLOC_018181 usta coding downstream 501987 31309364 ~ 31427390 (-)
XLOC_018180 hpcal1 coding downstream 620572 31232923 ~ 31308805 (-)
XLOC_018186 rab32a coding upstream 2062 32009271 ~ 32045182 (-)
XLOC_018187 grm1a coding upstream 40176 32047385 ~ 32112818 (-)
XLOC_018188 NA coding upstream 129816 32137025 ~ 32139068 (-)
XLOC_018189 cep57l1 coding upstream 134353 32141562 ~ 32149020 (-)
XLOC_018190 si:ch211-51a19.5 coding upstream 176620 32183829 ~ 32188897 (-)
XLOC_017928 CU539064.1 misc downstream 21875676 10053405 ~ 10053701 (-)
XLOC_018177 NA non-coding downstream 862071 31002188 ~ 31067306 (-)
XLOC_018178 AL929014.1 non-coding downstream 884172 31045075 ~ 31045205 (-)
XLOC_018176 NA non-coding downstream 956204 30965883 ~ 30973173 (-)
XLOC_018171 NA non-coding downstream 1122903 30800868 ~ 30806474 (-)
XLOC_018195 CU138515.2 non-coding upstream 453066 32460275 ~ 32460391 (-)
XLOC_018196 CR354385.1 non-coding upstream 642634 32649843 ~ 32649959 (-)
XLOC_018200 NA non-coding upstream 1222954 33230163 ~ 33293844 (-)
XLOC_018201 NA non-coding upstream 1341965 33349174 ~ 33463368 (-)

Expression


Co-expression Network