XLOC_018203 (erh)


Basic Information

Item Value
gene id XLOC_018203
gene name erh
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 33493924 ~ 33497128 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035867
ACCGGAAGTGTGATCGTTTCTTGAACATTCCTGCTGTTTCCTTCGCTGCTAACAGTGAATAGCCGTCAGTGGTTACCCCAGCGTTCAACGCCACTTTTATACATCAGGACCAGATATGTCTCACACAATTCTGCTGGTGCAGCCCACCAAGAGACCAGAAGGCAGAACATATGCAGATTATGAGTCTGTCAACGAATGTATGGAAGGAGTGTGTAAGATGTATGAAGAGCATCTGAAGAGAATGAATCCCAACAGTCCCTCCATCACATATGACATAAGCCAGTTATTCGACTTTGTTGATGATCTTGCCGATCTCAGCTGTCTTGTGTACAGAGCGGACACACAAACCTACCAGCCTTACAACAAAGACTGGATCAAAGAAAAGATCTATGTGCTGTTGAGGCGTCAGGCCCAACAGGCTGGAAAATAAAGACGGTGGAATTATTGAACTAGTCCCCAACTACGCTTCATCACAGGACAGACGTGGCTGAACTGAACAGTGAATTGATGCCAACTGGTTCAGATTTTGTTGAATGCATGTCCTTTGAGTTATGTCAAAAGCATAGAGTgaaaatattttgcattttaaatcacatttttgtaACTTCGGAGTTCGGGACTTGGGTTATTTATCGGGCTAGAGGGTAATATTGGGGAAAGAAAAGTTTTAGGATTTTTTTCGTTGTTGTTGCTCCCGATCCCTCCCAATTAATGATGTTTTATATTGtggatttatttttgatttagtaAAGTATAACATTTACACATTTCAGATGTTGTTGAGATGGTTCCGAGTTATTCTTATATCCCAACTTTTGTCCTCTGTGTTGTTAAAGGTTTTGTTGGCCCTCTCTGATTTGTGCATCCAGTAGTAAAAACTGGCAAACAATAAAATTCTTCTCAAAAAACGTGGAAATGTca

Function

symbol description
erh Predicted to be located in nucleus. Orthologous to human ERH (ERH mRNA splicing and mitosis factor).

GO:

id name namespace
GO:0007049 cell cycle biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-990415-57 Predicted to be located in nucleus. Orthologous to human ERH (ERH mRNA splicing and mitosis factor).

Ensembl:

ensembl_id ENSDARG00000032866

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035867 True 921 mRNA 0.41 4 33493924 33497128

Neighbor

gene id symbol gene type direction distance location
XLOC_018202 smek1 coding downstream 6195 33467161 ~ 33487729 (-)
XLOC_018201 NA coding downstream 30556 33349174 ~ 33463368 (-)
XLOC_018200 NA coding downstream 200080 33230163 ~ 33293844 (-)
XLOC_018199 nbas coding downstream 319025 32838467 ~ 33174899 (-)
XLOC_018197 si:dkey-6f10.3 coding downstream 741467 32655858 ~ 32752457 (-)
XLOC_018204 paplnb coding upstream 2250 33499378 ~ 33512443 (-)
XLOC_018205 si:dkey-65b13.13 coding upstream 16536 33513664 ~ 33515890 (-)
XLOC_018206 rock2bl coding upstream 58253 33555381 ~ 33556983 (-)
XLOC_018207 si:dkey-65b13.9 coding upstream 67297 33564425 ~ 33566640 (-)
XLOC_018208 rock2b coding upstream 74184 33571312 ~ 33583779 (-)
XLOC_017928 CU539064.1 misc downstream 23440223 10053405 ~ 10053701 (-)
XLOC_018196 CR354385.1 non-coding downstream 843965 32649843 ~ 32649959 (-)
XLOC_018195 CU138515.2 non-coding downstream 1033533 32460275 ~ 32460391 (-)
XLOC_018188 NA non-coding downstream 1354856 32137025 ~ 32139068 (-)
XLOC_018210 BX571790.1 non-coding upstream 203989 33701117 ~ 33701233 (-)
XLOC_018211 NA non-coding upstream 210990 33708118 ~ 33711255 (-)
XLOC_018212 NA non-coding upstream 216412 33713540 ~ 33717068 (-)
XLOC_018213 NA non-coding upstream 223866 33720994 ~ 33722205 (-)
XLOC_018214 NA non-coding upstream 228764 33725892 ~ 33728373 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G468455 NA unknown CI01000325 null 9287209 ~ 9287324 (-)