XLOC_018205 (si:dkey-65b13.13)


Basic Information

Item Value
gene id XLOC_018205
gene name si:dkey-65b13.13
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 33513664 ~ 33515890 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035871
AAACGGGCACGATTAGACAGGGAGACACAGCAGAGGATTAGTCTGTGTTTGTCTGCGTTTCTGCATGCGTCTTCCTCTTGTTTCTTTCACGACTTTTATACAGGACTGTAGCGCGGCAGGATGACCCAACAACAGGAGAAGCTGGAGTGTCTGATGAAGAGTATGGAGGTGCTGCTGAGAGAGGTGGAGCAGCTACGTGGACACTGTGGCCATTACAACCTGGAGCTCAGTCGCCACATCACCGAGCTCCGCCTGGAGAACCGGATACTGACCGACAAATACAACGCTCTGGACAAGGAGCTGCAGGAAGCCTGGGAGACCATTGAGGACCTCCAAGACACCAAATATGCTCTGGATGCCAAAGAAAGACAGGCTGAGAAGCTGAGCCGAAAGCTGTGATTAACTGTAGACATGCAGCGACCAAAGGTTTTTAGGGTTTAGCGCCTCAATGCAGCTTGTTGATTCAAGCGTATTCATTTTCATCCTTATATTTAAGAAGCAGACACTCTCCAGCCACTTTATCAAGTACTGTTAACTGGAGATCTCTAATAAGTCAATCGCATGGCAGACAGTCAATGCATTCAAACATGTAGATGaagtcaagatgatctgctgaagtTTAAATTGagtgaagaaaggtgatttaagtgacaacGATCACTGGTGTTTATAAAAATACTCCAAAAAGGAGAAGATATTAAGTGAGTGGCACTTCTTTGGGTGGAAGTGGCTTGACGATGCCAGATACCAGAAAAGAATGGCAAAACTGGTTCATGCTAATGAAAACAATGACAATGTTAACTCAAATAATGACTTGTTACAGCCAAAAAGGAAaagatatccagtgagtggcagttctttgGGTAAAAGGGGTTTGTCAATGTCAgatatcagaggagaatggcaaaGCTGGTTCACGCTGATAAAAACAACAAgaatattaaatcaaataatgaCTTGTTACAGCGGATAAGAGCATTTATGAACACAAGCTTGGCGAAACCTGAAGCAGACAAGCTACAACAGAAGATAAGCACACTGTTGACTCTCTTTGTGAAAGGACACAATTCACAAAAGCTCACCAAATGTTGACAATAGAAGTCTAGAAAAAATTGTCTGGTCTGGAATGTTTTCAATTTTGCTTCAACATTGGATGgaggtcagaatttggtgtaaacaacaaaaaagcatggTTCTATCCTGTCTTGCATCTTTTCAGGCTGTTCAGGTGCTGGTATTAAATAAGAAGAATATTTTCTTGACCCACTTTTGGCCTCTTAGTACCACTTGAGCATTGTTTAAATTTTATAGTCTACCTGAGTGCTGTGACCAGCCATGTCCATCTCATTGTATTGGATAATGTCATGTCACAAAGCTCAACTGATCTCATATTGGTGTCTTGAACATCcaatgagttcactattcttaagTTGCTTCCACAATCCAGCAAAGCGCTTTTCGGTGTTGCTGGAATGGGTGATATGCATAATGGATTTGTAGTCAACaaatgtcagtatggaccaaaaacCTTGTTGAATCTCAAGAATTAAGACACTCCTGGCGTGAAAATAAGCTCAATCTGATTCTGCAAtatgtaccaaataaagtggctggtgagtgtatgtcaTGTCTATATATCTTTTCTATGTGGAAGTGAAGCAGTCCTGTAGGTAAAGTTGGCACAGTGAGTCTACATTCTCCTTCACAATGACAGGCATTTTGGTTGCTGAAAAGTGAAAGGGACTAAAATAGTACCTTAGAGGACTGAATGTCACACTGAAAGAACTTCCACCCCTATGATTTAATACTATATGTTTAGTGGCACTAGAGGAACAAATGTGGGTAGAGCATTGAAAAGGTCCCTGCAGAATCTttcacacattaaataaatatgcttttatAATCTCtttctaaattatatttttaggCTGTGGTCCGATTTAGGTTTTAGGATTACATGGTCAGTGTTTGGAATTGACGACCAGATTTACTTACAGAAGTTCTGAAATGCCCTGTTCACAGTTCAGCTTACAAAAGATGTTTGGACACTGTCTGTATGAATGATAGACTGTAAAGAATATGGACAATGCATCTTCATATCGATCAGCATTAGAAAAATGAAGTCAAAATGGCCACTGATGATGCCATTTGGAGCCAGAGGTATCACTGTCTAACCATACCCCTGTCTAACCTTAACTCCTGCTGATTAAACTTCATAAAAACTGAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101924

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035871 True 2227 mRNA 0.41 1 33513664 33515890

Neighbor

gene id symbol gene type direction distance location
XLOC_018204 paplnb coding downstream 1221 33499378 ~ 33512443 (-)
XLOC_018203 erh coding downstream 16536 33493924 ~ 33497128 (-)
XLOC_018202 smek1 coding downstream 25935 33467161 ~ 33487729 (-)
XLOC_018201 NA coding downstream 50296 33349174 ~ 33463368 (-)
XLOC_018200 NA coding downstream 219820 33230163 ~ 33293844 (-)
XLOC_018206 rock2bl coding upstream 39491 33555381 ~ 33556983 (-)
XLOC_018207 si:dkey-65b13.9 coding upstream 48535 33564425 ~ 33566640 (-)
XLOC_018208 rock2b coding upstream 55422 33571312 ~ 33583779 (-)
XLOC_018209 rock2b coding upstream 85156 33601046 ~ 33705044 (-)
XLOC_018210 BX571790.1 coding upstream 185227 33701117 ~ 33701233 (-)
XLOC_017928 CU539064.1 misc downstream 23459963 10053405 ~ 10053701 (-)
XLOC_018196 CR354385.1 non-coding downstream 863705 32649843 ~ 32649959 (-)
XLOC_018195 CU138515.2 non-coding downstream 1053273 32460275 ~ 32460391 (-)
XLOC_018188 NA non-coding downstream 1374596 32137025 ~ 32139068 (-)
XLOC_018211 NA non-coding upstream 192228 33708118 ~ 33711255 (-)
XLOC_018212 NA non-coding upstream 197650 33713540 ~ 33717068 (-)
XLOC_018213 NA non-coding upstream 205104 33720994 ~ 33722205 (-)
XLOC_018214 NA non-coding upstream 210002 33725892 ~ 33728373 (-)

Expression


Co-expression Network