Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_018207 |
| gene name | si:dkey-65b13.9 |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 33564425 ~ 33566640 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| si:dkey-65b13.9 | Predicted to enable Rho-dependent protein serine/threonine kinase activity. Predicted to be involved in several processes, including Rho protein signal transduction; actin cytoskeleton organization; and peptidyl-threonine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in centrosome and cytoplasm. |
| id | name | namespace |
|---|---|---|
| GO:0018107 | peptidyl-threonine phosphorylation | biological_process |
| GO:0007266 | Rho protein signal transduction | biological_process |
| GO:0031032 | actomyosin structure organization | biological_process |
| GO:0048598 | embryonic morphogenesis | biological_process |
| GO:1901888 | regulation of cell junction assembly | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0030866 | cortical actin cytoskeleton organization | biological_process |
| GO:0000281 | mitotic cytokinesis | biological_process |
| GO:0005813 | centrosome | cellular_component |
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0072518 | Rho-dependent protein serine/threonine kinase activity | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041014-335 | Predicted to enable Rho-dependent protein serine/threonine kinase activity. Predicted to be involved in several processes, including Rho protein signal transduction; actin cytoskeleton organization; and peptidyl-threonine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in centrosome and cytoplasm. |
| ensembl_id | ENSDARG00000105249 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00035873 | True | 545 | mRNA | 0.47 | 3 | 33564425 | 33566640 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_018206 | rock2bl | coding | downstream | 7442 | 33555381 ~ 33556983 (-) |
| XLOC_018205 | si:dkey-65b13.13 | coding | downstream | 48535 | 33513664 ~ 33515890 (-) |
| XLOC_018204 | paplnb | coding | downstream | 51982 | 33499378 ~ 33512443 (-) |
| XLOC_018203 | erh | coding | downstream | 67297 | 33493924 ~ 33497128 (-) |
| XLOC_018202 | smek1 | coding | downstream | 76696 | 33467161 ~ 33487729 (-) |
| XLOC_018208 | rock2b | coding | upstream | 4672 | 33571312 ~ 33583779 (-) |
| XLOC_018209 | rock2b | coding | upstream | 34406 | 33601046 ~ 33705044 (-) |
| XLOC_018210 | BX571790.1 | coding | upstream | 134477 | 33701117 ~ 33701233 (-) |
| XLOC_018211 | NA | coding | upstream | 141478 | 33708118 ~ 33711255 (-) |
| XLOC_018212 | NA | coding | upstream | 146900 | 33713540 ~ 33717068 (-) |
| XLOC_017928 | CU539064.1 | misc | downstream | 23510724 | 10053405 ~ 10053701 (-) |
| XLOC_018201 | NA | non-coding | downstream | 101057 | 33349174 ~ 33463368 (-) |
| XLOC_018200 | NA | non-coding | downstream | 270581 | 33230163 ~ 33293844 (-) |
| XLOC_018196 | CR354385.1 | non-coding | downstream | 914466 | 32649843 ~ 32649959 (-) |
| XLOC_018195 | CU138515.2 | non-coding | downstream | 1104034 | 32460275 ~ 32460391 (-) |
| XLOC_018188 | NA | non-coding | downstream | 1425357 | 32137025 ~ 32139068 (-) |
| XLOC_018213 | NA | non-coding | upstream | 154354 | 33720994 ~ 33722205 (-) |
| XLOC_018214 | NA | non-coding | upstream | 159252 | 33725892 ~ 33728373 (-) |
