LOC110522386 (LOC106577258)


Basic Information

Item Value
gene id LOC110522386
gene name LOC106577258
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 84760098 ~ 84781879 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036987540.1
cacacacacatacacgacaCACGCTCGAGCCTCGCTAGTAAGTTCCCGCCCTCCCGCGAAGCTCGAGCCGCGCAGTCCCAAGAGCAGAAGATTTCAGCACGGGACAGATCCTGCACCGTCTCATGGCAACATGTCGACTGAGttCCATAACCTACAGGAGTTGAGACACAGTGTGTCTGTAGCCACCAAGGTGTTCATCCAGAGAGACTACAGCCAAGGGACTACCTGTCGCTTCCAGACTAAGTTCCCCTCTGAGCTGGACAGCaggattgagcgGACCCTGTTGGAAGACACAGTGAAGACGTTGAACAGCTACTATGCAGAGGCAGAGAAGATGGGAGGCCAGTCCTACATGGAGGGATGTCTGGCGTGCGCTACAGCCTACCTCATCTTCCTCTGTATGGAGACACGTTATGAGAAgATGTTGAAGAAGATCTCAGGGTACATCCAGGAGCAGAATGAGAAGATCTACGCCCCCAGAGGTCTATTACTGACAGACCCTATAGAGAGAGGCATGAGAGTCATCGAGGTGAGTGTATTTGAGGACCGCGGCTCGAGCGGCTCTAGCCACAGCAGCAGTGTGTCGTCTGGTGGCAGCAGCCAGCGGTGACTGGAGGATCAGCACCAGGGATATGGGTACCACCACAGAAGCGGCAGATCTTTCACCAACATCCGCATGCTGAAACAAGAGAGCACCCGCTTCTGATTATAGATGTATATCAATGTAATCAATATACTATCTCTAGTTTAGAGTATAGATGCATATCTaatcaatatactgtctctagttCTGAGTATAGATGCATATGTCATACAGGAAGTAAACATTGAttgtatatactatctgtagatGTGTGCCAGGGAGACTAAAGAGAGAGGCCAGGATGAGGCTACTGAAGAACAGGAGCAGACATGGAAACACACATCTTTGAGTATCTGATGGTTAGACTCATGTTTCTGCAGACTATTCATTCAGCCGACTGTCATTCTGCTGTGTCACCATTCCCTGTGTTTCCATGACTTCAATTGGAACTATTATGCCATAGccaatacagatgtaggatcttaatttgatcaacctgttccaggagaactttcctgctaagcaggaaatgtaaaatgtgtagtgtatttgaggtttaaaaaggcttctgaagtctGTAATTTCCAAAATGTTAACGTGTTAATTTCCACTTAAAAAATGgatcaacccctacaaatatgtgaattaattataatccacaaagtaattcacatttcctgttgctgcaggattattttcctgatgTAGCAAACTGGATCAAATGGAATATTTTGAAGTAGtagtatttgatttattttatttcacctttattttaccaggtaggccagttgagaacaagttctcatttacaactgtg

Function

NR:

description
PREDICTED: golgin subfamily A member 7B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036987540.1 True 1400 mRNA 0.45 5 84760098 84781879

Neighbor

gene id symbol gene type direction distance location
LOC110532813 LOC106613040 coding downstream 428398 84291760 ~ 84331700 (-)
LOC110531033 LOC106577242 coding downstream 503149 84157529 ~ 84256949 (-)
LOC110531009 NA coding downstream 633266 84122691 ~ 84126832 (-)
LOC110530947 LOC106577244 coding downstream 649427 84097627 ~ 84110671 (-)
LOC110530927 LOC106577245 coding downstream 711968 84031554 ~ 84104730 (-)
LOC118966724 LOC106613591 coding upstream 379871 85161750 ~ 85171855 (-)
LOC110516660 tarbp1 coding upstream 390065 85171944 ~ 85207269 (-)
LOC110510599 LOC106613623 coding upstream 431503 85213382 ~ 85244441 (-)
LOC110510598 LOC106594326 coding upstream 465459 85247338 ~ 85299641 (-)
LOC110519057 col19a1 coding upstream 576343 85358222 ~ 85624716 (-)
G95485 NA non-coding downstream 1615 84757244 ~ 84758483 (-)
G95486 NA non-coding downstream 4292 84755616 ~ 84755806 (-)
G95483 NA non-coding downstream 8508 84750143 ~ 84751590 (-)
G95502 NA non-coding downstream 19807 84740068 ~ 84740291 (-)
G95501 NA non-coding downstream 20107 84739731 ~ 84739991 (-)
G95535 NA non-coding upstream 33258 84815137 ~ 84815399 (-)
G95540 NA non-coding upstream 41766 84823645 ~ 84823875 (-)
G95548 NA non-coding upstream 57929 84839808 ~ 84840125 (-)
G95533 NA non-coding upstream 70118 84851997 ~ 84853771 (-)
G95565 NA non-coding upstream 90549 84872428 ~ 84873769 (-)
G95494 NA other downstream 30675 84728864 ~ 84729423 (-)
G94821 NA other downstream 555634 84203487 ~ 84204464 (-)
G94613 NA other downstream 957627 83801332 ~ 83802471 (-)
G95624 NA other upstream 197854 84979733 ~ 84980272 (-)
G95784 NA other upstream 375863 85157742 ~ 85159313 (-)
G96002 NA other upstream 564979 85346858 ~ 85351766 (-)

Expression


Co-expression Network