G60580



Basic Information


Item Value
gene id G60580
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 55170415 ~ 55170726 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU67265
ggctgggtctttcagcatgacaatgatcccaaacacaccgcccgggcaacgaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtccgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctgaatggaggaaaaccttgtgaagacttacagaaaacgtttgacctctgtcattgccaacaaagggtatataacaaagtattgaga

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU67265 True 284 lncRNA 0.48 2 55170415 55170726

Neighbor


gene id symbol gene type direction distance location
LOC110525476 LOC106573024 coding downstream 42145 55071579 ~ 55128270 (-)
LOC118964914 NA coding downstream 136156 54978911 ~ 55034259 (-)
LOC110525471 NA coding downstream 203862 54963456 ~ 54966553 (-)
LOC110525462 LOC106561729 coding downstream 235771 54905357 ~ 54934644 (-)
LOC110525455 LOC106573025 coding downstream 298090 54830826 ~ 54872325 (-)
LOC110525505 LOC106573040 coding upstream 573681 55744407 ~ 55801039 (-)
LOC110525190 LOC106573044 coding upstream 731171 55901897 ~ 56147404 (-)
LOC110525232 NA coding upstream 898479 56069205 ~ 56079783 (-)
LOC110521481 LOC106573508 coding upstream 1364943 56535669 ~ 56544298 (-)
smoc2 smoc2 coding upstream 1620895 56791621 ~ 56873384 (-)
G60517 NA non-coding downstream 100570 55069610 ~ 55069845 (-)
G60506 NA non-coding downstream 126292 55043855 ~ 55044123 (-)
G60478 NA non-coding downstream 154767 55011079 ~ 55015648 (-)
G60097 NA non-coding downstream 345570 54824634 ~ 54824845 (-)
G60588 NA non-coding upstream 9184 55179910 ~ 55180197 (-)
G60623 NA non-coding upstream 32314 55203040 ~ 55203262 (-)
G60629 NA non-coding upstream 35293 55206019 ~ 55206260 (-)
G60630 NA non-coding upstream 35675 55206401 ~ 55206635 (-)
G60636 NA non-coding upstream 39291 55210017 ~ 55210342 (-)
G60572 NA other downstream 16157 55150241 ~ 55154258 (-)
G60516 NA other downstream 99516 55070392 ~ 55070899 (-)
G59978 NA other downstream 433171 54729131 ~ 54737244 (-)
G58958 LOC106581842 other downstream 1373401 53791830 ~ 53797014 (-)
LOC110525178 LOC106581842 other downstream 1407519 53761612 ~ 53774544 (-)
G60614 NA other upstream 22571 55193297 ~ 55193723 (-)
G60624 NA other upstream 32691 55203417 ~ 55203742 (-)
G61563 NA other upstream 662099 55832825 ~ 55833928 (-)
G61715 NA other upstream 982704 56153430 ~ 56153918 (-)
G61978 NA other upstream 1354244 56524970 ~ 56533975 (-)

Expression



Co-expression Network