LOC118937130


Basic Information

Item Value
gene id LOC118937130
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 29231578 ~ 29232721 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034523.1
gttctgcagTGCATGACACTGTAATAGAAACAGTTCATTGACGTTAATTACAATTATCCTTACCCAATGGAGAAATTCCTACTAGTGCTTGTGGTTTTTCATGGATCTCAGAAGGAACCACATCCTGTTCTCCCTCGCCACACCTACTTTTGTCATCTTCAagactctattccctatagagtgttACTTTTGGCCACAAGGAGCAGGCTGAGTTTGCTAGGCTTTTCGCCGGGCAGCAGTCGTTCGTTGGCCTGCTGACGGATGACAACATGCTGTCTCCCTGTGAGATCCAGAGGTAGACTAACCAGACAAACTTCACCTCTGGAAACGTGATCAACTGGGGGGGGGGCCCTGGACTTCCCGACTACAGACGAGTACTGCTGGAGAACAAGCAGTCAGGCTGTAACCTTTTAAACATGTAATCAACCAAATAAATCTAAGTCCAATCAA

Function

NR:

description
serum amyloid P-component-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034523.1 True 450 mRNA 0.46 3 29231578 29232721

Neighbor

gene id symbol gene type direction distance location
LOC100136336 stea4 coding upstream 34938 29172098 ~ 29196640 (+)
LOC110486065 NA coding upstream 60459 29164798 ~ 29171119 (+)
LOC110486049 stea4 coding upstream 69769 29150877 ~ 29161809 (+)
LOC110486020 LOC106605423 coding upstream 150042 29060588 ~ 29081536 (+)
LOC110486009 LOC106605422 coding upstream 177035 29038928 ~ 29054543 (+)
LOC110486083 LOC106605428 coding downstream 137114 29369835 ~ 29418297 (+)
LOC110534631 LOC106580029 coding downstream 192101 29424822 ~ 29478401 (+)
LOC110486208 NA coding downstream 312523 29545045 ~ 29553946 (+)
LOC118944146 NA coding downstream 361443 29594164 ~ 29594216 (+)
LOC118936731 dcst2 coding downstream 422154 29654875 ~ 29662028 (+)
LOC110485935 LOC106605415 non-coding upstream 366403 28783574 ~ 28865311 (+)
G128813 NA non-coding upstream 379769 28851577 ~ 28851809 (+)
G128638 NA non-coding upstream 457996 28768219 ~ 28773582 (+)
G128760 LOC106579893 non-coding upstream 512843 28712992 ~ 28718735 (+)
G128747 NA non-coding upstream 537611 28693692 ~ 28693967 (+)
G129093 NA non-coding downstream 122751 29355472 ~ 29356526 (+)
G129099 NA non-coding downstream 134253 29366974 ~ 29367331 (+)
G129149 NA non-coding downstream 240561 29473282 ~ 29473490 (+)
G129151 NA non-coding downstream 241532 29474253 ~ 29474520 (+)
G129153 NA non-coding downstream 243051 29475772 ~ 29475990 (+)
G128853 LOC106605419 other upstream 250290 28939899 ~ 28981288 (+)
LOC110485990 LOC106579931 other upstream 287188 28931988 ~ 28951235 (+)
G128490 NA other upstream 683663 28250842 ~ 28547915 (+)
G128436 NA other upstream 1142133 28088647 ~ 28089445 (+)
G128185 NA other upstream 1514415 27716482 ~ 27717163 (+)
G129155 NA other downstream 251912 29484633 ~ 29485130 (+)
G130308 NA other downstream 367305 29600026 ~ 29641096 (+)
LOC110486279 LOC106605442 other downstream 453246 29685855 ~ 29697686 (+)
G130414 NA other downstream 556855 29789576 ~ 29789831 (+)

Expression


Co-expression Network