brsk2a (LOC106560719)


Basic Information

Item Value
gene id brsk2a
gene name LOC106560719
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 45596003 ~ 46132114 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949734.1
GCGAGTGTTCCAACCGCATCTACAGCATCCCGACAGGCGAACACTGGCACTGCAGGCTCAACCAACAATGATTTTCGGATCCTCGGCAAAAGCACTCTCCGTACATCTGCAGGAAACCGAGAGGAAAGGGGTAGAGAGAATCCTTCGTACCCaaacagcgcgagagagagagagagtccgagtgagtgcagagcgagagagagacgggaggatAGGCAAGTGGGTTTGTGGAGTAAAAAAAGAACGCCTGGACCTGCCAAGATCAAGAGGATTGTGTGTTATTCTCGGAATAATTGCAACTGCGCTTATTTGCAAAGTGTTTTTTTCGCCAATCAAAATGTCATCGTCTGGGAAAGACAACAGTGGTGCTCAACATGCCAATTACGTGGGACCGTATCGCTTGGAAAAGACGCTCGGCAAAGGACAGACAGGCCTGGTCAAGCTGGGGATCCACTGTGTCACATGCCAGAAAGTTGCAATTAAGATTGTCAACCGAGAGAAACTCAGCGAGTCGGTACTAATGAAGGTTGAGCGGGAAATAGCGATTCTGAAGCTCATAGAACACCCTCACGTTTTAAAGCTGCACGACGTCTACGAAAATAAGAAATACTTGTATCTGGTGTTAGAGCACGTCTCAGGGGGAGAGCTCTTTGACTACCTGGTAAAGAAGGGACGATTAACACCCAAGGAGGCCAGGAAGTTCTTCAGACAGATCATCTCTGCACTGGACTTCTGCCATAGTCACTCCATATGccaCAGAGATTTGAAGCCAGAGAACCTGTTGTTAGATGAGAAGAACAACATCAGGGTAGCAGACTTTGGCATGGCCTCTCTACAGGTCGGCGACAGTCTGCTGGAGACCAGCTGTGGATCTCCACACTATGCATGCCCAGAGGTTATACGGggGGAGAAGTATGACGGCAGAAAAGCAGACGTGTGGAGCTGTGGGGTCATCCTCTTTGCCCTATTGGTGggTGCCCTTCCATTTGATGATGACAATCTGAGGAACCTGCTGGAGAAGGTGAAGCTAGGAGTGTTCCATATGCCCCACTTCATACCCCCAGACTGTCAGAACCTCCTCCGGGGCATGATCGAGGTAGACGCCACCAAACGGCTAACGTTAGAACAGATTCAGAAGCACAACTGGTACATAGGGGGTAAGAATGAACCCGAACCAGAGCAGCCTGTTCCCAGGAAGGTGGCTATACGGAGCCTGCCATCTACAGACGACATAGATCCGGATGTACTGGACAGCATGCATTCTCTGGGCTGCTTCAGAGACAAGAACAAACTGATGAAGGACCTGCTCTCGGACGAAGATAACCAGGAGAAGATGATCTACTTCCTGCTGTTGGACCGTAAGGAGAGGTACCCCAGCCACGAGGACCAGAACCTGCCCCCACGCAATGAGATTGaccCCCCCAGGAAGCGTGTGGACTCCCCCATGCTGAACCGCCATGGCAAAAAGAGACCGGAGAGGAAGTCTATGGAGGTGCTGAGTGTCACAGACGGAGGCTCCCCCGTACCCGCCAGAAGGGCCATCGACATGACACAGCACGGACAGAGGTCAAGGTCCATAAGTGGAGCATCTTCCGGTCTCTCCACTAGCCCTCTCAGCAGCCCACGGGTTACCCCTCACCCATCCCCCCGGGGCAGCCCCCTCCCCACCCCCAAGGGCACCCCTGTGCACACACCCAAGGAGAGCCCGGCGGGCACGCCCAACCCCACGCCGCCCCCCAGTCCATCTATCGGCGGTATGCCCTGGAGGACACGCCTCAACTCCATCAAGAACAGCTTCCTGGGCTCGCCGCGCTTTCACCGCAGGAAACTACAAGTTCCCACACAAGAGGAGATGTCCAGCCTCACACCAGAGTCTTCCCCAGAACTTGCCAAAAAATCCTGGTTTGGTAACTTCATCAACCTGGATAAAGAGGAGCAGATCTTCATCTTGATCAAAGACAAGCCTCTGAGCTCCATCAAGGCTGACATCGTCCATGCCTTTCTTTCGATCCCTAGTCTCAGCCACAGTGTGATCAGCCAGACGAGTTTCCGGGCAGAGTACAAGTCCACAGCCGGCCCCACGGTCTTCCAGAAGCCAGTCAAGTTCCAGGTGGACATCACCTACACAGAGAGCACCACCGCCCCCAAGGAGAACGGCATCTACTCTGTCACCTTTACCCTGCTCTCAGgaccCAGCCGGCGCTTCAAGCGGGTGGTAGAGACAATTCAGGGCCAGTTGCTAAGCACACATGACCAGCCGGGAGTTCAGCAGCTTTCTGGAATTATCCAGAAAACCTATTAGATCCTCCTCCTGCCTCCCTGCTCCACTCCGCCTATCCTCTTCCTCCTTGGCCATCACTTCAACCCCACCGTCTGCACACCAAGAGATGGACATTTGTTGACGGAGTTGGGGACCGCTTTTCAAGGGGCCTCCTTCGCTACCCCGAGCAGCAGTCCCCGAGGGAGAAAACAGCAATCCATATCCCTCCGATACACAAGCATGTTATACAcatacaaatgcacacacacacacacacttttatgcCTTcacatgtatatacacacacacaccttgagatTATTAAGCATTTAACACCCAAACACACAATCTCATTACACAAATAAAAACACGCTCCCCTTCTCACACACTATTGCACAGTATTTATAGACAAACTCTGGGATGTAATAAGAACAAAGAATAAAAAAATGGACAGAACAATGAAGTGACCAAAAGGAGAAGCGAAGGAGGATGAGTTTGTTGATCTACTGTAGTATCAACATCCGACGCGGACGCTTGCTGGATTGTATCGTTTCTCTTTATAATGTACTTCCTCTTTCTTCGTGAAGAAACTGGATTTAAAAATACTAAATGGACATTTATTAGACTCAATACCATTGCTGCAAATTGACTGGAATTGCTATTTCAGAAAGCAAGGGGTGTATGCAGta

Function

NR:

description
PREDICTED: serine/threonine-protein kinase BRSK2 isoform X2

GO: NA

KEGG:

id description
K08796 BRSK; BR serine/threonine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949734.1 True 2949 mRNA 0.51 19 45596003 46132114

Neighbor

gene id symbol gene type direction distance location
tsg101a tsg101 coding upstream 127158 45444073 ~ 45468845 (+)
LOC110490546 LOC106560730 coding upstream 340160 45203309 ~ 45255843 (+)
LOC110490437 LOC106584212 coding upstream 1042024 44551163 ~ 44553979 (+)
LOC110490388 LOC106604983 coding upstream 1123079 44464974 ~ 44472924 (+)
LOC110490326 LOC106605007 coding upstream 1635011 43955049 ~ 43960992 (+)
spty2d1 spty2d1 coding downstream 834022 46966136 ~ 46980755 (+)
uevld uevld coding downstream 849572 46981686 ~ 47007672 (+)
cpt1ab LOC100653436 coding downstream 1002101 47134215 ~ 47205441 (+)
igf2b igf2 coding downstream 1236066 47368180 ~ 47373699 (+)
osbpl5 LOC106560704 coding downstream 1895295 48027409 ~ 48133974 (+)
G148415 NA non-coding upstream 56017 45539630 ~ 45539986 (+)
G148254 NA non-coding upstream 76160 45514746 ~ 45519843 (+)
G148252 NA non-coding upstream 83545 45510939 ~ 45512458 (+)
G148134 NA non-coding upstream 305851 45289913 ~ 45290152 (+)
G148129 NA non-coding upstream 313341 45282402 ~ 45282662 (+)
G148959 LOC100136012 non-coding downstream 170268 46302382 ~ 46302597 (+)
G148967 NA non-coding downstream 185936 46318050 ~ 46321610 (+)
G148968 NA non-coding downstream 190542 46322656 ~ 46337873 (+)
G149016 NA non-coding downstream 253886 46386000 ~ 46386199 (+)
G149021 NA non-coding downstream 260489 46392603 ~ 46392907 (+)
G148191 NA other upstream 103624 45472082 ~ 45492379 (+)
G147510 NA other upstream 724503 44870800 ~ 44871500 (+)
G146841 NA other upstream 1166610 44429153 ~ 44429393 (+)
G146226 NA other upstream 1598938 43996780 ~ 43997065 (+)
G146165 NA other upstream 1706394 43886596 ~ 43889609 (+)
G150997 NA other downstream 1365834 47497948 ~ 47547579 (+)
G152167 NA other downstream 2424668 48556782 ~ 48557686 (+)
LOC110491026 LOC106560691 other downstream 3966302 50098387 ~ 50100624 (+)
G154859 NA other downstream 5033301 51165415 ~ 51167174 (+)

Expression


Co-expression Network