G106551


Basic Information

Item Value
gene id G106551
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3604546 ~ 3605227 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120543
TAAAAACACTGCAGCATCTCTGGCCAGATATCAGATGTGTGGTAGGCTGGTTACTGGGTATTAAACACTGCAGCATCTCTGGCCAGATATCAGATGTGTGGTAGGCTGGTTACTGGGTATTAAACACTGCAGCATCTCTGACCAGATATCAGATGTGTGGTAGGCTGGTTACTGGGTATTAAACACTGCTGCATCTCTGCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120543 True 202 lncRNA 0.45 2 3604546 3605227

Neighbor

gene id symbol gene type direction distance location
mboat1 LOC106573215 coding upstream 182447 3350582 ~ 3487129 (+)
LOC118937337 NA coding upstream 624353 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 626022 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 1183925 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 1426550 2166121 ~ 2177996 (+)
colec10 LOC106591867 coding downstream 445556 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 460765 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 507895 4113122 ~ 4119742 (+)
deptor deptor coding downstream 631653 4236880 ~ 4302536 (+)
col14a1a col14a1 coding downstream 722756 4327983 ~ 4572381 (+)
G106543 NA non-coding upstream 10814 3592039 ~ 3593732 (+)
G106535 NA non-coding upstream 27762 3576080 ~ 3576784 (+)
G106522 NA non-coding upstream 55477 3544715 ~ 3549069 (+)
G106523 NA non-coding upstream 59418 3544479 ~ 3545128 (+)
G106520 NA non-coding upstream 67237 3536981 ~ 3537309 (+)
G106555 NA non-coding downstream 3883 3609110 ~ 3609738 (+)
G106564 NA non-coding downstream 21299 3626526 ~ 3627642 (+)
G106568 NA non-coding downstream 26397 3631624 ~ 3632148 (+)
G106572 NA non-coding downstream 30413 3635640 ~ 3636535 (+)
G106573 NA non-coding downstream 31588 3636815 ~ 3638985 (+)
G106253 cdkal other upstream 213513 3006312 ~ 3391033 (+)
G106240 NA other upstream 565071 2974823 ~ 3039475 (+)
G106122 NA other upstream 886021 2717961 ~ 2718525 (+)
G106019 NA other upstream 1076574 2520716 ~ 2527972 (+)
G106575 NA other downstream 34207 3639434 ~ 3800352 (+)
G106595 NA other downstream 71038 3676265 ~ 3677850 (+)
G106775 NA other downstream 421848 4027075 ~ 4027594 (+)
G106814 NA other downstream 532586 4137813 ~ 4138496 (+)
G107922 NA other downstream 1138941 4744168 ~ 4745586 (+)

Expression


Co-expression Network