XLOC_020878 (CABZ01061508.1)


Basic Information

Item Value
gene id XLOC_020878
gene name CABZ01061508.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8446780 ~ 8455462 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041092
GCATTAGTGCCACTGTGCTGCCATGGCAATGCCAGTAAAATGACACATCTCGACTTCATGGTCATTAAAATTTTTGTAAATTGAATATTGGTTAATAAAACAATAGATACTTATTACAAAGCAGTTTTGGTTTTCAGCCAAGTGCATCTAGAATTTTGTGTTTTGGACCTAAATTTTATTTCCATCACATACCTAGTTTGCTTTGATGTATTTGATTTGTTGGTCTGCTTTGCCTGCTCACCttgtttatttcttgttttttttttttttcttgtttggcCCTGTGATGCCATGCGTTTTTGTTAGCCTGCATTACATTATTATCTTGACAATAATAAACTGCTTGTATCCTCCACCCAGAGTTTGGCCTGACATTAACAGCACTAAAGTTTTAATTTCCACATCATCACTGTTAAACAGGAGAATGGGAATGCCTGCGTTTCTACTAACAAATGATGCGAAGATCGTATCCGTGAAGGAGGGAGAATCTGTCACCCTAAAGCCTGATGCTGTAATTCAGAGAGACGATCAGATACTGTGGACATTTGGACCGCAAGAGACTCTTATTGCTGGGTTCAATGGAAATACCAGAGAGATCTCCACAGGTGATGGTGCTGAtgggagattcagagacagactggTGTTGGACTCTAAGACTGGATCAGTAACAATAACAAACACAGCAAGCGAACATGTTGGAGTCTATAAACTGAAGATCAACAGTAGCACTGGGACCTCATACCAAACCTTCATTCTTACTCTCACACATGAAGAAGATGTGATGTCAGTGACAGAGGGTAGTTCTGTCACTTTAGACACTGACACTGAAATACAGAAAGACAATCTGATCCTGTGGATGTTTAGAGATGAAGACAGTCTCATAGCTCAATTGGATAAGACCACAAACACGGTCGCCTTTCCTGATGCAAGATTTAGAAGTTTGAAACTCGACAAaaagactggatctctgaccatcataaactttaaaaatattcacacaggACTGTACAAACTACAGATCAGCAACAGTGGCAAGATAACCTCAAGCAAGACCTTTAAAGTGCTGGTAAACTTCAAAGTGTCAGTGACAGAGGGAGATGCTGTCACGCTAAAGGTTCATGTTGAAATTGCTAAAACAGATGAGATACAGTGGCTATACGAAGAAAACTCTCTTATAGCTGAAATCAAAGAAGGGAGCGTGGAGATTCTTAAATCTTATACAGCTGATGGGAGATTCAGAGGCAGACTGATGTTGGATGAcaagactggatctctgaccatcaagaACACCAGACCCGAACATGCTGGATGTTATACACTAAAGATAAACAGCAGCAAAGGGCCATTGGAAAGACAGTTCTTTGTTATTGTCAGAGCGAGTATGATATTAGGAAAGAAGGGAAACAACGTCACTCTGAATGTTCATGCTGAATTACAAAGAGATGATCTGATCCTGTGGATGTTTGGAGACGAAAACAACCTCATAGCTCAAATGAACGGAGAAACATCAGAGAGCACATTTACTAAAGCCGACGAGAGATTCAGAGACAAACTGCTGCTGGACAAGATGACTGGATCTCTGACTATCAGTGACATCACAAGCGAACACTCCGGAGCTTATAAACTACACATCATCAGCAGCAAAAAGTCCATCTACAGCTCATTCAGAGTCTTTTTGTGTGGTGAGTCTGTTCCAAACACTGTGTCAGTGATGGCAGGAGAAAGCCTTATTTTGATCACTAATTTTAATGTAGAGCAAGATGAGAAGCTGTACTGGACATTTGAAGGTGTGATGCTAGCATCTGGAATGAACGGAGACGTCAGTAAGACTTTCTACAAGAGTAATTGGAGTTTCAGAGACAGGTTGGAGCTGCATCATCAAAGCGCATCTCTGACTGTGAAAAACACCAGAAGCAGCGACTCTGGAGTTTATCAGCTGAACTTGTGGAATAAACACAAGAAACACATTCACTTGGATGTCAATGTTAGCGTTTCTGatgACACCAGAAACACACTGAATCAATCAGTAAATGTACAGATGCCACATGGAGAAATCCAGAGTAATCTGTGAGTTAAACAGACCTTCCTGAAAACCTGTAGACGTTTTGAAAGCTTTAGATATGAAACACTAtcctaaaaaatcttaaatcaagaagcgttttctaGACTTGACTttctagtcttgttttaagaaataatgtcaaaattaagtgagttttttttctcctaaAACAAGACATGTGTTGGCGTGTCTAAAAAATGTTTCGtgatttaagaattttagatatttggactagaagcaagGCTAAAATCTAagttaaaaaagcatttttacagtgtagttaaaccTGTGCATGTTAATGAATCACAACCATTAGTAAATAGGATGAGTACATATGTGATATGTCTTACAGCTGTCTTCAGTCTTTTGACTATGCAGATATTGACAGGTTTGTCAGTTTAAGAAACAAAGTGTTTTGACTATTTATCCAGCAGAGGGCCACAGAGGTCTGTTATTTATTGGGTTGCAGTCAACTTTGTCTGTGACCTCAATGTTTGATATGTGTTGCTACATTACATTGATGTCTATTGATCAGACCGTTCAccaataaattaacatttactcactatttactcctcCTCAAGTCATTGCAAACCgttattgattgatttttgtgcatgaaaaatgttagaaagctgtaaacattgacttctattataagaAAAGCTGAtgttatggaagtcagtggttacagatatccattatttctttaaaatgtcttttgtgttcaacagaagagaagaagctggtttgtgacaagtgaagagagagtaaatgatgatgcaaatgaactgtccctttaattactGCTTAGAATGATCATTAAATAGGTTTGCTATAATGTGAAGTGTGATTTAATAGAAATGTGCATGAAATATAGTTTTGCAACATGCAGATCAGAGGACGTTTAGCTTGAACATAGATTGACTTGTGATCACGCATTTAATTTTGTAACTGTGCTCAGTTCTTCTTTTGACTAATTTTACCCTTAATGCTGTTATGATCTAGTGGTCAGCAGCTTCCCAGAATGCTGTTTTAACAAACACACCCACATCTATTGAGAAATGACAGCTTTAAACGGGTTTCCTTCCATCTAAtggtttattttactttgtttttaaagACCAAATACTgtcattaaattttattttcagcatgtaaataaagtgtgacaataataaagttgttttctttttaaatatatatatatatataattgggcATCTTTATTTCCAATTAAGTCATGAAAACTTGCAAAACTGTTATATGCTGAGTTTGACTTACAATTGCAAGTCTAACTGActaaagatgtaaaataaacattgagctgaattattgtgtttgcaaatgtaatatttttacccCAACATAAAGGAGGCACAAGAATTaaaatacaagttttttttttttttttttaataatgtaacaaATAACAATTGAATGCTTATGCAAATGCATAAAAGATATCTTGGATATCACTTTCCCAGCAATTGAGAGAGAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110634

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041092 True 3563 mRNA 0.37 7 8446780 8455462

Neighbor

gene id symbol gene type direction distance location
XLOC_020877 NA coding downstream 2469 8439819 ~ 8444311 (-)
XLOC_020875 NA coding downstream 37699 8405161 ~ 8409081 (-)
XLOC_020874 CABZ01061498.1 coding downstream 58102 8380715 ~ 8388678 (-)
XLOC_020872 CABZ01061495.1 coding downstream 93394 8337699 ~ 8353386 (-)
XLOC_020873 CABZ01061495.2 coding downstream 100580 8346075 ~ 8346200 (-)
XLOC_020879 si:ch73-27e22.4 coding upstream 41577 8497039 ~ 8501332 (-)
XLOC_020880 si:ch73-27e22.3 coding upstream 50706 8506168 ~ 8509215 (-)
XLOC_020881 CR974475.1 coding upstream 62195 8517657 ~ 8546430 (-)
XLOC_020882 zmp:0000001175 coding upstream 67115 8522577 ~ 8648144 (-)
XLOC_020883 si:ch73-27e22.2 coding upstream 75738 8531200 ~ 8536482 (-)
XLOC_020870 NA non-coding downstream 154481 8284934 ~ 8292299 (-)
XLOC_020867 NA non-coding downstream 293381 8140611 ~ 8153399 (-)
XLOC_020886 CR450686.3 non-coding upstream 335181 8790643 ~ 8797226 (-)
XLOC_020893 FO393424.4 non-coding upstream 484471 8939933 ~ 8951684 (-)
XLOC_020896 NA non-coding upstream 820894 9276356 ~ 9305802 (-)
XLOC_020897 NA non-coding upstream 823316 9278778 ~ 9315172 (-)

Expression


Co-expression Network