XLOC_020969 (CR847870.5)



Basic Information


Item Value
gene id XLOC_020969
gene name CR847870.5
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 12584839 ~ 12584954 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00041246
gccacagccatatcaccctgcagcccaagaccgggtACTCACTgatgctaagcagggctgagcctggtcagtacctggatgggaaaccacgtgggaaaactagattgctggtggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000107957

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00041246 True 116 rRNA 0.56 1 12584839 12584954

Neighbor


gene id symbol gene type direction distance location
XLOC_020968 zranb3 coding downstream 247058 12217920 ~ 12337781 (-)
XLOC_020967 tmem163b coding downstream 423744 12094484 ~ 12161095 (-)
XLOC_020966 pth2rb coding downstream 628932 11898661 ~ 11955907 (-)
XLOC_020965 ptpn4b coding downstream 751505 11778053 ~ 11833334 (-)
XLOC_020964 krt222 coding downstream 855489 11717429 ~ 11729350 (-)
XLOC_020970 cep70 coding upstream 19348 12604302 ~ 12626207 (-)
XLOC_020971 adarb1a coding upstream 56626 12641580 ~ 12693837 (-)
XLOC_020972 CR847870.3 coding upstream 114167 12699121 ~ 12726556 (-)
XLOC_020973 plcd4a coding upstream 144375 12729329 ~ 12746539 (-)
XLOC_020974 cnot9 coding upstream 167332 12752286 ~ 12763350 (-)
XLOC_020962 NA non-coding downstream 886164 11697272 ~ 11698675 (-)
XLOC_020961 NA non-coding downstream 910418 11672189 ~ 11674421 (-)
XLOC_020951 NA non-coding downstream 1480568 11102905 ~ 11104271 (-)
XLOC_020950 BX649485.2 non-coding downstream 1493740 11090338 ~ 11091099 (-)
XLOC_020949 NA non-coding downstream 1495139 11087404 ~ 11089700 (-)
XLOC_020975 NA non-coding upstream 192935 12777889 ~ 12786441 (-)
XLOC_020979 NA non-coding upstream 348336 12933290 ~ 12940709 (-)
XLOC_020980 NA non-coding upstream 364866 12949820 ~ 12950292 (-)
XLOC_020981 NA non-coding upstream 373268 12958222 ~ 12964877 (-)
XLOC_020948 NA non-coding downstream 1487002 11082942 ~ 11097837 (-)

Expression



Co-expression Network