G125957


Basic Information

Item Value
gene id G125957
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 25727307 ~ 25784903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU145447
agagacagagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagcgacagagagagagagagagagagagaagagagagagagaaagacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145447 True 213 lncRNA 0.39 2 25727307 25784903

Neighbor

gene id symbol gene type direction distance location
LOC110539045 mrap2 coding upstream 312932 25403433 ~ 25414375 (+)
LOC110534557 LOC106605501 coding upstream 330973 25377221 ~ 25396334 (+)
LOC110534548 LOC106579462 coding upstream 401651 25294643 ~ 25325656 (+)
ascc3 ascc3 coding upstream 435783 25151016 ~ 25291524 (+)
LOC110538989 NA coding upstream 1003934 24685282 ~ 24723373 (+)
tsnare1 LOC106605505 coding downstream 46500 25831403 ~ 25974877 (+)
LOC110539113 LOC106605506 coding downstream 314240 26099143 ~ 26113953 (+)
cdk14 LOC106605507 coding downstream 338810 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding downstream 538104 26323007 ~ 26326895 (+)
LOC110539173 LOC106605512 coding downstream 667778 26452681 ~ 26547503 (+)
G125926 NA non-coding upstream 10351 25671258 ~ 25716956 (+)
G125925 NA non-coding upstream 56413 25669061 ~ 25670894 (+)
G125902 NA non-coding upstream 100911 25626191 ~ 25626396 (+)
G125895 NA non-coding upstream 110366 25616524 ~ 25616941 (+)
G125856 NA non-coding upstream 134311 25592662 ~ 25592996 (+)
G125997 NA non-coding downstream 41296 25826199 ~ 25833719 (+)
G126021 NA non-coding downstream 80787 25865690 ~ 25866121 (+)
G126341 NA non-coding downstream 230913 26015816 ~ 26016025 (+)
G126375 NA non-coding downstream 252726 26037629 ~ 26038230 (+)
G126418 NA non-coding downstream 303329 26088232 ~ 26093529 (+)
G124451 LOC106578403 other upstream 853473 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 1183081 24540963 ~ 24544247 (+)
G124121 LOC106605585 other upstream 1578714 24146861 ~ 24148593 (+)
LOC110538497 LOC106605627 other upstream 1845671 23861576 ~ 23881639 (+)
G126387 LOC105417071 other downstream 264947 26049850 ~ 26050104 (+)
G126727 LOC106581475 other downstream 841946 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 1009307 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 1072795 26857698 ~ 26861242 (+)
LOC110485212 LOC106605536 other downstream 1363273 27147880 ~ 27175747 (+)

Expression


Co-expression Network