G126543


Basic Information

Item Value
gene id G126543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 26333018 ~ 26333224 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU146056
aatgtggtgtggatctgctttttttctaaagtatttttttttacttctgaaccggaatcccccaacagaagctaactagctactagctagtagtcagctaatcACTGCTAGCGATCATCAGCTAACCTATAGCTCGGAAAACTCTCGCCAGTTTGCACAACACAATTCAAACCaaagcataccggacctattttctctctATATCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146056 True 207 lncRNA 0.41 1 26333018 26333224

Neighbor

gene id symbol gene type direction distance location
cdk14 LOC106605507 coding upstream 2037 26123713 ~ 26330981 (+)
fzd1 LOC106605515 coding upstream 6123 26323007 ~ 26326895 (+)
LOC110539113 LOC106605506 coding upstream 219065 26099143 ~ 26113953 (+)
tsnare1 LOC106605505 coding upstream 358141 25831403 ~ 25974877 (+)
LOC110539045 mrap2 coding upstream 918643 25403433 ~ 25414375 (+)
LOC110539173 LOC106605512 coding downstream 119457 26452681 ~ 26547503 (+)
LOC110539182 LOC106605509 coding downstream 246534 26579758 ~ 26581796 (+)
LOC110539212 LOC106605509 coding downstream 248544 26581768 ~ 26585441 (+)
LOC110539196 LOC106605517 coding downstream 263041 26596265 ~ 26613437 (+)
trnar-acg-2 NA coding downstream 307943 26641167 ~ 26641239 (+)
G126396 NA non-coding upstream 212839 26119808 ~ 26120179 (+)
G126397 NA non-coding upstream 214695 26117987 ~ 26118323 (+)
G126418 NA non-coding upstream 239489 26088232 ~ 26093529 (+)
G126375 NA non-coding upstream 294788 26037629 ~ 26038230 (+)
G126545 NA non-coding downstream 2333 26335557 ~ 26335980 (+)
G126548 NA non-coding downstream 4844 26338068 ~ 26338357 (+)
G126546 NA non-coding downstream 6338 26339562 ~ 26339896 (+)
G126549 NA non-coding downstream 6693 26339917 ~ 26340149 (+)
G126561 NA non-coding downstream 25974 26359198 ~ 26359582 (+)
G126387 LOC105417071 other upstream 282914 26049850 ~ 26050104 (+)
G125934 NA other upstream 575165 25682880 ~ 25757853 (+)
LOC110534557 LOC106605501 other upstream 950706 25377221 ~ 25396334 (+)
G124451 LOC106578403 other upstream 1459184 24873051 ~ 24873834 (+)
LOC110538915 LOC106605649 other upstream 1788792 24540963 ~ 24544247 (+)
G126727 LOC106581475 other downstream 293625 26626849 ~ 26628649 (+)
G127190 cf113 other downstream 460986 26794210 ~ 26795762 (+)
G127198 LOC106605538 other downstream 524474 26857698 ~ 26861242 (+)
LOC110485212 LOC106605536 other downstream 814952 27147880 ~ 27175747 (+)
G127644 LOC106605534 other downstream 856767 27189991 ~ 27190593 (+)

Expression


Co-expression Network