G132416


Basic Information

Item Value
gene id G132416
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31937124 ~ 31937342 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU152567
CAGTACTTAGCTAATTATCCCAGTCATAGGCTGTAAAAGTGCTGTCGACAAGAGGTTTCAGTGCTTCCTAATGGGCAAAGCAACTCTGGCAGCCCCCGCATGGATTCCTGCAGTTCTGTCATCTTTCTGCTGGGTATTTGATGAGAACACATTAGCTGTGAACACATGAGGGGACAATGAcaatagagctctctctctctttctctttctctctatccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152567 True 219 lncRNA 0.48 1 31937124 31937342

Neighbor

gene id symbol gene type direction distance location
LOC110487037 LOC106605342 coding upstream 3970 31913680 ~ 31933154 (+)
LOC110534719 LOC106605346 coding upstream 79529 31841738 ~ 31857595 (+)
LOC110486995 atg5 coding upstream 313110 31589474 ~ 31624014 (+)
eaf1 LOC106581241 coding upstream 570802 31360408 ~ 31366322 (+)
LOC110486933 can7 coding upstream 621211 31300002 ~ 31315913 (+)
LOC110487045 LOC106581064 coding downstream 4624 31941966 ~ 31974601 (+)
LOC110487089 LOC106581052 coding downstream 48017 31985359 ~ 31987549 (+)
LOC110534747 LOC106605338 coding downstream 50342 31987684 ~ 32027099 (+)
LOC110487062 LOC106605340 coding downstream 119177 32056519 ~ 32063386 (+)
LOC110487115 LOC106580947 coding downstream 394749 32332091 ~ 32348968 (+)
G132413 NA non-coding upstream 2873 31933957 ~ 31934251 (+)
G132407 NA non-coding upstream 23871 31912956 ~ 31913253 (+)
G132402 NA non-coding upstream 33435 31903040 ~ 31903689 (+)
G132342 LOC100136303 non-coding upstream 57918 31834170 ~ 31887572 (+)
G132311 NA non-coding upstream 89811 31763180 ~ 31847313 (+)
G132417 NA non-coding downstream 1853 31939195 ~ 31939419 (+)
G132439 NA non-coding downstream 39618 31976960 ~ 31977176 (+)
G132441 NA non-coding downstream 42246 31979588 ~ 31979690 (+)
G132442 NA non-coding downstream 44027 31981369 ~ 31981617 (+)
G132443 NA non-coding downstream 44533 31981875 ~ 31982285 (+)
LOC110534710 LOC106605356 other upstream 644090 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 1187170 30748055 ~ 30749954 (+)
G131491 NA other upstream 1236501 30700182 ~ 30700623 (+)
G133473 LOC106605294 other downstream 1230096 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 1559112 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 1876691 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 2025075 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 2750613 34687955 ~ 34692286 (+)

Expression


Co-expression Network