G132417


Basic Information

Item Value
gene id G132417
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31939195 ~ 31939419 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU152568
CCTAAAAGGTCATTGTCTGGCCTCATTAGTACTATCTGACACAGCTGTAATAATGAAACCATAATGAGATATTATTAGTAAGTATATACAGTGATGTTGGTCATTGAATGACCTCGGGTCATCTGCTAAACTCTTCTCCAATCTCACTTTATCATGTTCATACCTGAGACAGGATATGTTACCCACACAGCAAACATCTTGCAGTGTTTCTTAGATAAAGGTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152568 True 225 lncRNA 0.38 1 31939195 31939419

Neighbor

gene id symbol gene type direction distance location
LOC110487037 LOC106605342 coding upstream 6041 31913680 ~ 31933154 (+)
LOC110534719 LOC106605346 coding upstream 81600 31841738 ~ 31857595 (+)
LOC110486995 atg5 coding upstream 315181 31589474 ~ 31624014 (+)
eaf1 LOC106581241 coding upstream 572873 31360408 ~ 31366322 (+)
LOC110486933 can7 coding upstream 623282 31300002 ~ 31315913 (+)
LOC110487045 LOC106581064 coding downstream 2547 31941966 ~ 31974601 (+)
LOC110487089 LOC106581052 coding downstream 45940 31985359 ~ 31987549 (+)
LOC110534747 LOC106605338 coding downstream 48265 31987684 ~ 32027099 (+)
LOC110487062 LOC106605340 coding downstream 117100 32056519 ~ 32063386 (+)
LOC110487115 LOC106580947 coding downstream 392672 32332091 ~ 32348968 (+)
G132416 NA non-coding upstream 1853 31937124 ~ 31937342 (+)
G132413 NA non-coding upstream 4944 31933957 ~ 31934251 (+)
G132407 NA non-coding upstream 25942 31912956 ~ 31913253 (+)
G132402 NA non-coding upstream 35506 31903040 ~ 31903689 (+)
G132342 LOC100136303 non-coding upstream 59989 31834170 ~ 31887572 (+)
G132439 NA non-coding downstream 37541 31976960 ~ 31977176 (+)
G132441 NA non-coding downstream 40169 31979588 ~ 31979690 (+)
G132442 NA non-coding downstream 41950 31981369 ~ 31981617 (+)
G132443 NA non-coding downstream 42456 31981875 ~ 31982285 (+)
G132451 NA non-coding downstream 95135 32034554 ~ 32034921 (+)
LOC110534710 LOC106605356 other upstream 646161 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 1189241 30748055 ~ 30749954 (+)
G131491 NA other upstream 1238572 30700182 ~ 30700623 (+)
G133473 LOC106605294 other downstream 1228019 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 1557035 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 1874614 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 2022998 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 2748536 34687955 ~ 34692286 (+)

Expression


Co-expression Network