G142858


Basic Information

Item Value
gene id G142858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 41105795 ~ 41106093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU164070
GGGAACAATAGCATAGCAAAGTAGCATGTGTGAGAGGTGGCAGGAGGAGTGTCGTGGGGCTGCAGACAGCAGACTGCCTACCTGCGATGCGGATGACGGCCCTCTCAGCCGGGTCCAGGACGTCCCCGGAGCCCGAGGCAGACTTAGAGCGTTTGACCCTCTGGTGTTTGTCCAGGTTCCAGGGGAGTGTGTCCCCAGGGCAGGGGGCAGGGAAGCTTCTCTCTCCATATCTTTCTAGCagggctctctccctctcccggtcCCTGTCCTTCTGCCTGTCCTTACGCCCCGACGCCatc

Function

NR:

description
plectin-like isoform X7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU164070 True 299 lncRNA 0.62 1 41105795 41106093

Neighbor

gene id symbol gene type direction distance location
LOC110489783 LOC106605064 coding upstream 220655 40881174 ~ 40885140 (+)
LOC110489695 LOC106605067 coding upstream 258036 40781026 ~ 40847759 (+)
LOC110489685 LOC106605069 coding upstream 452413 40636099 ~ 40653382 (+)
galr1a LOC106605071 coding upstream 786532 40309178 ~ 40319263 (+)
LOC110489640 LOC106583530 coding upstream 880463 40115958 ~ 40292372 (+)
LOC110489815 LOC106605058 coding downstream 188588 41294681 ~ 41355200 (+)
LOC110489825 LOC106605056 coding downstream 348166 41454259 ~ 41460908 (+)
LOC110489834 eny2 coding downstream 433147 41539240 ~ 41541654 (+)
LOC110489853 sybu coding downstream 588344 41694437 ~ 41710790 (+)
LOC110489869 LOC106605052 coding downstream 624592 41730685 ~ 41741910 (+)
G142850 NA non-coding upstream 10730 41094810 ~ 41095065 (+)
G142846 NA non-coding upstream 15930 41089447 ~ 41089865 (+)
G142845 NA non-coding upstream 16896 41088700 ~ 41088899 (+)
G142844 NA non-coding upstream 20476 41085103 ~ 41085319 (+)
G142809 NA non-coding upstream 69474 41035855 ~ 41036321 (+)
G142863 NA non-coding downstream 4042 41110135 ~ 41110359 (+)
G142864 NA non-coding downstream 5613 41111706 ~ 41112083 (+)
G143045 NA non-coding downstream 9170 41115263 ~ 41115532 (+)
G143066 NA non-coding downstream 28270 41134363 ~ 41138768 (+)
G143068 NA non-coding downstream 37209 41143302 ~ 41143572 (+)
G139179 NA other upstream 3054051 38051359 ~ 38051744 (+)
G139101 NA other upstream 3161783 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 3165081 37919735 ~ 37940714 (+)
G139004 NA other upstream 3281785 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 4703824 36354883 ~ 36405310 (+)
G143938 LOC106605049 other downstream 862281 41968374 ~ 41969317 (+)
G144661 NA other downstream 1404237 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 2624779 43730872 ~ 43731218 (+)
G146091 NA other downstream 2662614 43768707 ~ 43769162 (+)

Expression


Co-expression Network